Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008779A_C01 KMC008779A_c01
(487 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08168 glutaminyl-peptide cyclotransferase (EC 2.3.2.5) pre... 98 4e-20
gb|AAM61216.1| glutamine cyclotransferase precursor-like protein... 85 5e-16
ref|NP_567727.1| glutamine cyclotransferase precursor - like pro... 85 5e-16
dbj|BAC22224.1| putative glutaminyl-peptide cyclotransferase [Or... 77 1e-13
ref|NP_421449.1| glutamine cyclotransferase [Caulobacter crescen... 58 6e-08
>pir||T08168 glutaminyl-peptide cyclotransferase (EC 2.3.2.5) precursor - papaya
gi|3342798|gb|AAC27745.1| glutamine cyclotransferase
precursor [Carica papaya]
Length = 288
Score = 98.2 bits (243), Expect = 4e-20
Identities = 45/72 (62%), Positives = 58/72 (80%)
Frame = -2
Query: 486 DGAVLGWILLPSLRKEPIEAGYMGLDVLNGIAWDHEPERIFVTGKLWPKLYEIKVLPIQT 307
DG +LGWILLP+LRK+ I+ G+ +DVLNGIAWD E +RIFVTGKLWPKL+EIK+ ++
Sbjct: 203 DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVRH 262
Query: 306 PIEEGIIEQLCL 271
I +G IE+ CL
Sbjct: 263 RIPDGYIERHCL 274
>gb|AAM61216.1| glutamine cyclotransferase precursor-like protein [Arabidopsis
thaliana]
Length = 320
Score = 84.7 bits (208), Expect = 5e-16
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -2
Query: 486 DGAVLGWILLPSLRKEPIEAGYMGLDVLNGIAWDHEPERIFVTGKLWPKLYEIKVLPIQT 307
DG++LGWILL L + +++G+ G+DVLNGIAWD + +R+FVTGKLWPKLY+IK L +
Sbjct: 249 DGSLLGWILLSKLSRGLLKSGHRGIDVLNGIAWDSDKQRLFVTGKLWPKLYQIK-LKQAS 307
Query: 306 PIEEGIIEQLCL 271
IEQ CL
Sbjct: 308 AKSRNYIEQQCL 319
>ref|NP_567727.1| glutamine cyclotransferase precursor - like protein; protein id:
At4g25720.1, supported by cDNA: 114197. [Arabidopsis
thaliana] gi|25054886|gb|AAN71928.1| putative glutamine
cyclotransferase precursor [Arabidopsis thaliana]
Length = 320
Score = 84.7 bits (208), Expect = 5e-16
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Frame = -2
Query: 486 DGAVLGWILLPSLRKEPIEAGYMGLDVLNGIAWDHEPERIFVTGKLWPKLYEIKVLPIQT 307
DG++LGWILL L + +++G+ G+DVLNGIAWD + +R+FVTGKLWPKLY+IK+ Q
Sbjct: 249 DGSLLGWILLSKLSRGLLKSGHRGIDVLNGIAWDSDKQRLFVTGKLWPKLYQIKLK--QA 306
Query: 306 PIEEG-IIEQLCL 271
+ G IEQ CL
Sbjct: 307 SAKSGNYIEQQCL 319
>dbj|BAC22224.1| putative glutaminyl-peptide cyclotransferase [Oryza sativa
(japonica cultivar-group)]
Length = 319
Score = 77.0 bits (188), Expect = 1e-13
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -2
Query: 486 DGAVLGWILLPSLRKEPIEAGYMGLDVLNGIAWDHEPERIFVTGKLWPKLYEIKVLPIQT 307
DG V+GWI L L+ +G +DVLNGIAWD E +R+F TGKLWPK+YEIK+ P+
Sbjct: 245 DGLVVGWIFLHELQ-HLWNSGNTEIDVLNGIAWDEENQRLF-TGKLWPKIYEIKLRPVDG 302
Query: 306 PIEEGIIEQLCLRKPF 259
P ++G +E+LC + F
Sbjct: 303 P-QDGSVEKLCPKASF 317
>ref|NP_421449.1| glutamine cyclotransferase [Caulobacter crescentus CB15]
gi|25354584|pir||E87577 glutamine cyclotransferase
[imported] - Caulobacter crescentus
gi|13424231|gb|AAK24617.1| glutamine cyclotransferase
[Caulobacter crescentus CB15]
Length = 260
Score = 57.8 bits (138), Expect = 6e-08
Identities = 33/56 (58%), Positives = 38/56 (66%), Gaps = 2/56 (3%)
Frame = -2
Query: 483 GAVLGWILLPSLRKEPIEAGYMGL--DVLNGIAWDHEPERIFVTGKLWPKLYEIKV 322
G V GWI L L E AG G DVLNGIA+D +R+FVTGKLWPKL+EIK+
Sbjct: 204 GRVKGWIELAGLLPE---AGVRGDRDDVLNGIAYDAAGDRLFVTGKLWPKLFEIKL 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 422,308,309
Number of Sequences: 1393205
Number of extensions: 8603196
Number of successful extensions: 18214
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18211
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13980339936
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
