Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008659A_C01 KMC008659A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC56815.1| putative ovule development protein antitegumenta... 62 5e-09
gb|AAM19141.1|AC103891_21 Putative ovule development protein ant... 61 8e-09
gb|AAA86281.1| CKC 40 0.020
ref|NP_195489.1| ovule development protein aintegumenta (ANT); p... 40 0.020
gb|EAA06227.1| agCP13209 [Anopheles gambiae str. PEST] 37 0.17
>dbj|BAC56815.1| putative ovule development protein antitegumenta (ANT) [Oryza
sativa (japonica cultivar-group)]
Length = 639
Score = 62.0 bits (149), Expect = 5e-09
Identities = 41/106 (38%), Positives = 61/106 (56%), Gaps = 9/106 (8%)
Frame = -3
Query: 427 VSLDHMFLHQEVEESSKVRSHVSNPSSLATSLSSSREGSPDR--------TSMAPVLSGI 272
V++D HQ+ ++ + +S SSL TSLS+SREGSPDR +P ++
Sbjct: 536 VAVDAAAAHQQQQQQQHMS--MSAASSLVTSLSNSREGSPDRGGGLSMLFAKPSPAVAAS 593
Query: 271 ASTAAASKLLAAN-PNSNVNSWDPSHHLRPALSLPQIPVFAAWTDA 137
A A++KL+AA P + S P+ PA+S+ +P+FAAWTDA
Sbjct: 594 AQQQASTKLMAAPLPLGSWVSSPPASARPPAVSIAHMPLFAAWTDA 639
>gb|AAM19141.1|AC103891_21 Putative ovule development protein antitegumenta (ANT) [Oryza
sativa (japonica cultivar-group)]
gi|27311244|gb|AAO00690.1| Putative ovule development
protein antitegumenta (ANT) [Oryza sativa (japonica
cultivar-group)]
Length = 588
Score = 61.2 bits (147), Expect = 8e-09
Identities = 35/75 (46%), Positives = 48/75 (63%)
Frame = -3
Query: 361 SNPSSLATSLSSSREGSPDRTSMAPVLSGIASTAAASKLLAANPNSNVNSWDPSHHLRPA 182
SN SSL TSLS+SREGSP+R +A + + TA + L A NP + + +H +RP
Sbjct: 516 SNSSSLVTSLSNSREGSPERLGLAMLYAKHHPTAVS--LAAMNPWMPMPAPAAAHVMRPP 573
Query: 181 LSLPQIPVFAAWTDA 137
++ +PVFAAWTDA
Sbjct: 574 SAIAHLPVFAAWTDA 588
>gb|AAA86281.1| CKC
Length = 555
Score = 40.0 bits (92), Expect = 0.020
Identities = 23/68 (33%), Positives = 37/68 (53%), Gaps = 3/68 (4%)
Frame = -3
Query: 331 SSSREGSPDRTSMAPVLSGIASTAAASKLLAANPNSNVNSW--DPSHHLRP-ALSLPQIP 161
S+ +P+R P + A K+ +N N++ W +P+ L+ AL+LPQ+P
Sbjct: 490 SNKEVSTPERLLSFPAI--FALPQVNQKMFGSNMGGNMSPWTSNPNAELKTVALTLPQMP 547
Query: 160 VFAAWTDA 137
VFAAW D+
Sbjct: 548 VFAAWADS 555
>ref|NP_195489.1| ovule development protein aintegumenta (ANT); protein id:
At4g37750.1, supported by cDNA: gi_1171428, supported by
cDNA: gi_1209098, supported by cDNA: gi_1244707,
supported by cDNA: gi_19310586 [Arabidopsis thaliana]
gi|2129537|pir||S71365 ovule development protein
aintegumenta - Arabidopsis thaliana
gi|1209099|gb|AAA91040.1| AINTEGUMENTA
gi|1244708|gb|AAB17364.1| ANT gi|4490720|emb|CAB38923.1|
ovule development protein aintegumenta (ANT)
[Arabidopsis thaliana] gi|7270758|emb|CAB80440.1| ovule
development protein aintegumenta (ANT) [Arabidopsis
thaliana] gi|19310587|gb|AAL85024.1| putative ovule
development protein aintegumenta [Arabidopsis thaliana]
gi|21436287|gb|AAM51282.1| putative ovule development
protein aintegumenta [Arabidopsis thaliana]
Length = 555
Score = 40.0 bits (92), Expect = 0.020
Identities = 23/68 (33%), Positives = 37/68 (53%), Gaps = 3/68 (4%)
Frame = -3
Query: 331 SSSREGSPDRTSMAPVLSGIASTAAASKLLAANPNSNVNSW--DPSHHLRP-ALSLPQIP 161
S+ +P+R P + A K+ +N N++ W +P+ L+ AL+LPQ+P
Sbjct: 490 SNKEVSTPERLLSFPAI--FALPQVNQKMFGSNMGGNMSPWTSNPNAELKTVALTLPQMP 547
Query: 160 VFAAWTDA 137
VFAAW D+
Sbjct: 548 VFAAWADS 555
>gb|EAA06227.1| agCP13209 [Anopheles gambiae str. PEST]
Length = 1259
Score = 37.0 bits (84), Expect = 0.17
Identities = 28/92 (30%), Positives = 41/92 (44%)
Frame = -3
Query: 559 SYDNNQEAILMQKSAESEGQSNQWKMVLCQNQNQPPRTHESFSAVSLDHMFLHQEVEESS 380
S DN E SAE + Q + V + + Q HE+ V LD + QE ES
Sbjct: 325 SNDNKIEQTANGSSAEQQAPKEQQRAVE-EEREQEEGCHETTLQVPLDVPWTKQEEIESD 383
Query: 379 KVRSHVSNPSSLATSLSSSREGSPDRTSMAPV 284
+ SN S +++S SSS S +S+ +
Sbjct: 384 SISESGSNSSGISSSSSSSSSTSSSTSSVEDI 415
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,321,827
Number of Sequences: 1393205
Number of extensions: 9658910
Number of successful extensions: 36555
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 34563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36408
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
