>KMC008602A_C01 KMC008602A_c01
AGAGAAGAAAATTGATATTCTGATATTTGTCAATTTACCAATACTAACTTGAAACGGAAC
AAGATGATCAAAATTTGTCTAAGTTACATATATATTACATTCTCAACATTGCTTAAGGAA
CGTTAATTCTGAGGCATCTGAAAATGAATGTTTAAGTTACACCACTCCTGAAGGAAGCCT
TACAACAAGTTGTCCGCCAAAGATGCTCTTGACGTAGTAGTAGCAAAAATCAGCCAGGAT
GAAAGTTTGGACAATTTCTGATAGAAGTACCATAGAAGGCCACAATCCATAACCCAAAGC
AGTTAGTAGACGGCCGCGAGTATCTAATACCTGGAGGACCCAATGTGCACAACTCAAGAA
CCTTGCAACTCCAAGGGCAAAAACGTAGTGTCCTGTGAATGGTTCAACAATCTTAGCGTT
CTGCATGACCCTCAGCTGAGGGAGAACTGATACAGCTTCAAGGTAAACACAAAAGCCCCA
GAG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC008602A_C01 KMC008602A_c01
         (483 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_568047.1| expressed protein; protein id: At4g38790.1, sup...   206  8e-53
ref|NP_177704.1| ER lumen protein retaining receptor, putative; ...   206  1e-52
ref|NP_565501.1| putative ER lumen protein retaining receptor; p...   204  3e-52
gb|AAK25949.1|AF360239_1 putative ER lumen protein retaining rec...   204  3e-52
gb|AAM61627.1| putative ER lumen protein retaining receptor [Ara...   202  1e-51

>ref|NP_568047.1| expressed protein; protein id: At4g38790.1, supported by cDNA:
           21759. [Arabidopsis thaliana] gi|21554272|gb|AAM63347.1|
           putative ER lumen protein retaining receptor
           [Arabidopsis thaliana]
          Length = 273

 Score =  206 bits (525), Expect = 8e-53
 Identities = 98/107 (91%), Positives = 102/107 (94%)
 Frame = -1

Query: 480 WGFCVYLEAVSVLPQLRVMQNAKIVEPFTGHYVFALGVARFLSCAHWVLQVLDTRGRLLT 301
           W  CVYLEAVSVLPQLRVMQN KIVEPFT HYVFALGVARFLSCAHWVLQV+DTRGRLL 
Sbjct: 167 WALCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVVDTRGRLLV 226

Query: 300 ALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVVRLPSGVV 160
           ALGYGLWPSMVL+SEIVQTFILADFCYYYVKS+FGGQLV+RLPSGVV
Sbjct: 227 ALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 273

>ref|NP_177704.1| ER lumen protein retaining receptor, putative; protein id:
           At1g75760.1 [Arabidopsis thaliana]
           gi|28950707|gb|AAO63277.1| At1g75760 [Arabidopsis
           thaliana]
          Length = 272

 Score =  206 bits (523), Expect = 1e-52
 Identities = 98/107 (91%), Positives = 101/107 (93%)
 Frame = -1

Query: 480 WGFCVYLEAVSVLPQLRVMQNAKIVEPFTGHYVFALGVARFLSCAHWVLQVLDTRGRLLT 301
           W FCVYLEAVSVLPQLRVMQN KIVEPFT HYVFALG+ARFLSCAHWVLQVLDTRGRLLT
Sbjct: 166 WAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDTRGRLLT 225

Query: 300 ALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVVRLPSGVV 160
           ALGYG WP MVLLSEIVQTFILADFCYYYVKS+ GGQLV+RLPSGVV
Sbjct: 226 ALGYGFWPIMVLLSEIVQTFILADFCYYYVKSLMGGQLVLRLPSGVV 272

>ref|NP_565501.1| putative ER lumen protein retaining receptor; protein id:
           At2g21190.1, supported by cDNA: 126278., supported by
           cDNA: gi_13430653 [Arabidopsis thaliana]
           gi|20197720|gb|AAD29797.2| putative ER lumen protein
           retaining receptor [Arabidopsis thaliana]
          Length = 269

 Score =  204 bits (520), Expect = 3e-52
 Identities = 95/107 (88%), Positives = 101/107 (93%)
 Frame = -1

Query: 480 WGFCVYLEAVSVLPQLRVMQNAKIVEPFTGHYVFALGVARFLSCAHWVLQVLDTRGRLLT 301
           WGFCVYLEAVSVLPQLRVMQN KIVEPFT HYVFALGVARF SCAHWVLQ++DT GRLL 
Sbjct: 163 WGFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLV 222

Query: 300 ALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVVRLPSGVV 160
            LGYGLWPSMV++SEIVQTFILADFCYYYVKS+FGGQLV+RLPSGVV
Sbjct: 223 VLGYGLWPSMVIISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 269

>gb|AAK25949.1|AF360239_1 putative ER lumen protein retaining receptor [Arabidopsis thaliana]
          Length = 269

 Score =  204 bits (520), Expect = 3e-52
 Identities = 95/107 (88%), Positives = 101/107 (93%)
 Frame = -1

Query: 480 WGFCVYLEAVSVLPQLRVMQNAKIVEPFTGHYVFALGVARFLSCAHWVLQVLDTRGRLLT 301
           WGFCVYLEAVSVLPQLRVMQN KIVEPFT HYVFALGVARF SCAHWVLQ++DT GRLL 
Sbjct: 163 WGFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLV 222

Query: 300 ALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVVRLPSGVV 160
            LGYGLWPSMV++SEIVQTFILADFCYYYVKS+FGGQLV+RLPSGVV
Sbjct: 223 VLGYGLWPSMVIISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 269

>gb|AAM61627.1| putative ER lumen protein retaining receptor [Arabidopsis thaliana]
          Length = 269

 Score =  202 bits (515), Expect = 1e-51
 Identities = 94/107 (87%), Positives = 100/107 (92%)
 Frame = -1

Query: 480 WGFCVYLEAVSVLPQLRVMQNAKIVEPFTGHYVFALGVARFLSCAHWVLQVLDTRGRLLT 301
           WGFCVYLEAVSVLPQLRVMQN KIVEPFT HYVFALGVARF SCAHWVLQ++DT GRLL 
Sbjct: 163 WGFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLV 222

Query: 300 ALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVVRLPSGVV 160
            LGYGLWPSMV++SEIVQ FILADFCYYYVKS+FGGQLV+RLPSGVV
Sbjct: 223 VLGYGLWPSMVIISEIVQAFILADFCYYYVKSVFGGQLVLRLPSGVV 269

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,519,091
Number of Sequences: 1393205
Number of extensions: 7694737
Number of successful extensions: 17804
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 17344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17760
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MFB100a08_f BP041235 1 544 2 GNf033h01 BP069802 62 474

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