Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008535A_C01 KMC008535A_c01
(615 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membr... 336 1e-91
ref|NP_200521.2| calcium-transporting ATPase; protein id: At5g57... 336 1e-91
dbj|BAA97361.1| Ca2+-transporting ATPase-like protein [Arabidops... 336 1e-91
ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma... 331 4e-90
sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, pl... 331 4e-90
>sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type (Ca2+-ATPase,
isoform 8) gi|25290678|pir||T52654 Ca2+-transporting
ATPase (EC 3.6.3.8) aca8, plasma membrane [validated] -
Arabidopsis thaliana gi|8919831|emb|CAB96189.1| plasma
membrane Ca2+-ATPase [Arabidopsis thaliana]
gi|17978917|gb|AAL47426.1| AT5g57110/MUL3_5 [Arabidopsis
thaliana]
Length = 1074
Score = 336 bits (862), Expect = 1e-91
Identities = 173/205 (84%), Positives = 185/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 GTEVAKESSDIIILDDNLLQC-EGVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 179
GTEVAKESSDIIILDDN + VRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS
Sbjct: 806 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 865
Query: 180 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAM 359
GDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR+EPLITNIMWRNLLIQA+
Sbjct: 866 GDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAI 925
Query: 360 YQVSVLLVLNFRGRSILGLTHDKFDHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFK 539
YQVSVLL LNFRG SILGL H+ +HA +VKNT+IFNAFVLCQ FNEFNARKPDE NIFK
Sbjct: 926 YQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFK 985
Query: 540 GVTKNYLFMGIVGLTVVLQIVIVEF 614
GV KN LFMGI+ +T+VLQ++IVEF
Sbjct: 986 GVIKNRLFMGIIVITLVLQVIIVEF 1010
>ref|NP_200521.2| calcium-transporting ATPase; protein id: At5g57110.1 [Arabidopsis
thaliana]
Length = 1082
Score = 336 bits (862), Expect = 1e-91
Identities = 173/205 (84%), Positives = 185/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 GTEVAKESSDIIILDDNLLQC-EGVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 179
GTEVAKESSDIIILDDN + VRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS
Sbjct: 806 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 865
Query: 180 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAM 359
GDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR+EPLITNIMWRNLLIQA+
Sbjct: 866 GDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAI 925
Query: 360 YQVSVLLVLNFRGRSILGLTHDKFDHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFK 539
YQVSVLL LNFRG SILGL H+ +HA +VKNT+IFNAFVLCQ FNEFNARKPDE NIFK
Sbjct: 926 YQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFK 985
Query: 540 GVTKNYLFMGIVGLTVVLQIVIVEF 614
GV KN LFMGI+ +T+VLQ++IVEF
Sbjct: 986 GVIKNRLFMGIIVITLVLQVIIVEF 1010
>dbj|BAA97361.1| Ca2+-transporting ATPase-like protein [Arabidopsis thaliana]
Length = 1099
Score = 336 bits (862), Expect = 1e-91
Identities = 173/205 (84%), Positives = 185/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 GTEVAKESSDIIILDDNLLQC-EGVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 179
GTEVAKESSDIIILDDN + VRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS
Sbjct: 823 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 882
Query: 180 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAM 359
GDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R PVGR+EPLITNIMWRNLLIQA+
Sbjct: 883 GDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAI 942
Query: 360 YQVSVLLVLNFRGRSILGLTHDKFDHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFK 539
YQVSVLL LNFRG SILGL H+ +HA +VKNT+IFNAFVLCQ FNEFNARKPDE NIFK
Sbjct: 943 YQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFK 1002
Query: 540 GVTKNYLFMGIVGLTVVLQIVIVEF 614
GV KN LFMGI+ +T+VLQ++IVEF
Sbjct: 1003 GVIKNRLFMGIIVITLVLQVIIVEF 1027
>ref|NP_188755.2| potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9); protein id: At3g21180.1
[Arabidopsis thaliana]
Length = 1086
Score = 331 bits (849), Expect = 4e-90
Identities = 167/205 (81%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 GTEVAKESSDIIILDDNLLQC-EGVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 179
GTEVAKESSDIIILDDN + VRWGRSVYANIQKFIQFQLTVNVAAL+INVVAA+SS
Sbjct: 823 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSS 882
Query: 180 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAM 359
GDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRNLL+Q+
Sbjct: 883 GDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSF 942
Query: 360 YQVSVLLVLNFRGRSILGLTHDKFDHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFK 539
YQV+VLLVLNF G SILGL H+ HAV+VKNT+IFNAFV+CQIFNEFNARKPDE N+F+
Sbjct: 943 YQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFR 1002
Query: 540 GVTKNYLFMGIVGLTVVLQIVIVEF 614
GV KN LF+ IVG+T +LQI+IV F
Sbjct: 1003 GVNKNPLFVAIVGVTFILQIIIVTF 1027
>sp|Q9LU41|ACA9_ARATH Potential calcium-transporting ATPase 9, plasma membrane-type
(Ca2+-ATPase, isoform 9) gi|9280219|dbj|BAB01709.1|
Ca2+-transporting ATPase [Arabidopsis thaliana]
Length = 1073
Score = 331 bits (849), Expect = 4e-90
Identities = 167/205 (81%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 GTEVAKESSDIIILDDNLLQC-EGVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISS 179
GTEVAKESSDIIILDDN + VRWGRSVYANIQKFIQFQLTVNVAAL+INVVAA+SS
Sbjct: 810 GTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSS 869
Query: 180 GDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAM 359
GDVPL AVQLLWVNLIMDTLGALALATEPPTDHLM R+PVGRREPLITNIMWRNLL+Q+
Sbjct: 870 GDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSF 929
Query: 360 YQVSVLLVLNFRGRSILGLTHDKFDHAVKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFK 539
YQV+VLLVLNF G SILGL H+ HAV+VKNT+IFNAFV+CQIFNEFNARKPDE N+F+
Sbjct: 930 YQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFR 989
Query: 540 GVTKNYLFMGIVGLTVVLQIVIVEF 614
GV KN LF+ IVG+T +LQI+IV F
Sbjct: 990 GVNKNPLFVAIVGVTFILQIIIVTF 1014
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,130,851
Number of Sequences: 1393205
Number of extensions: 10281308
Number of successful extensions: 26089
Number of sequences better than 10.0: 621
Number of HSP's better than 10.0 without gapping: 24426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25301
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
