>KMC008480A_C01 KMC008480A_c01
cttTAAGTATAATATGAATCTAATTGATTATATTCCCTCAAATAACAGTATCCAAAATAT
TTCAGTGAGGTCTAATGAGCAATTTGTTATTCAGTTAGATGATCCTACCTTTAATGATGA
CATTGTCTGCTACATGCCGCGTCTTGCAGCTAACATTTCTCCATTTATGGAGGTCAGCAT
GGCTTTCCACTGTTATCACCATAATGCAAAATGCATTGGTATACTACGCCTAGGCCCTAG
CTTCAGAAGAGCCTGAGTGTAAACATGTAGCGCAAAACCTAATACAAACAACACAACCCC
ATTTTTCCTTTCTTCTTGGCCTTTCAGAGCCATACACTACTAAGTGGAATGAGGATGACT
AGAACCGTTAGTTTTTTTCCTTCTCGATACTATCTCTGATGCCCAAGCTTGGCCAATTTC
AGTTGGAAACTTCCCAGCAGTTGATGGGAAAAATTCATCCAAATCCTTTCCCTGTTCATG
TTCATATTCCAAGGCTTGAAGGATCATTTCCACCTTATCAAGATCCTTCACAAATTTGGC
TTCTGGAGAAGAATTT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC008480A_C01 KMC008480A_c01
         (556 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_564240.1| expressed protein; protein id: At1g26160.1, sup...    89  4e-17
pir||G86387 hypothetical protein F28B23.16 - Arabidopsis thalian...    89  4e-17
dbj|BAB92794.1| P0039G05.13 [Oryza sativa (japonica cultivar-gro...    74  1e-12
ref|NP_179962.1| unknown protein; protein id: At2g23820.1 [Arabi...    71  8e-12
gb|AAH03357.1|AAH03357 Similar to CGI-130 protein [Homo sapiens]       54  1e-06

>ref|NP_564240.1| expressed protein; protein id: At1g26160.1, supported by cDNA:
           37861., supported by cDNA: gi_15810416, supported by
           cDNA: gi_21280856 [Arabidopsis thaliana]
           gi|15810417|gb|AAL07096.1| unknown protein [Arabidopsis
           thaliana] gi|21280857|gb|AAM45013.1| unknown protein
           [Arabidopsis thaliana] gi|21593302|gb|AAM65251.1|
           unknown [Arabidopsis thaliana]
          Length = 258

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 45/60 (75%), Positives = 50/60 (83%)
 Frame = -2

Query: 555 NSSPEAKFVKDLDKVEMILQALEYEHEQGKDLDEFFPSTAGKFPTEIGQAWASEIVSRRK 376
           N+S EA  VKD DKVEMILQALEYE E GK LDEFF STAGKF TEIG++WA+EI +RRK
Sbjct: 191 NASLEANIVKDFDKVEMILQALEYEAEHGKVLDEFFISTAGKFQTEIGKSWAAEINARRK 250

>pir||G86387 hypothetical protein F28B23.16 - Arabidopsis thaliana
           gi|12321182|gb|AAG50684.1|AC079829_17 hypothetical
           protein [Arabidopsis thaliana]
          Length = 248

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 45/60 (75%), Positives = 50/60 (83%)
 Frame = -2

Query: 555 NSSPEAKFVKDLDKVEMILQALEYEHEQGKDLDEFFPSTAGKFPTEIGQAWASEIVSRRK 376
           N+S EA  VKD DKVEMILQALEYE E GK LDEFF STAGKF TEIG++WA+EI +RRK
Sbjct: 181 NASLEANIVKDFDKVEMILQALEYEAEHGKVLDEFFISTAGKFQTEIGKSWAAEINARRK 240

>dbj|BAB92794.1| P0039G05.13 [Oryza sativa (japonica cultivar-group)]
          Length = 461

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 36/51 (70%), Positives = 43/51 (83%)
 Frame = -2

Query: 516 KVEMILQALEYEHEQGKDLDEFFPSTAGKFPTEIGQAWASEIVSRRKKTNG 364
           KVEMILQALEYE E GK LDEFF STAGKF TEIG++WA+E+ +RR++  G
Sbjct: 408 KVEMILQALEYEKEHGKVLDEFFLSTAGKFQTEIGKSWAAEVNARREQRCG 458

>ref|NP_179962.1| unknown protein; protein id: At2g23820.1 [Arabidopsis thaliana]
           gi|25412160|pir||D84629 hypothetical protein At2g23820
           [imported] - Arabidopsis thaliana
           gi|3738315|gb|AAC63656.1| unknown protein [Arabidopsis
           thaliana]
          Length = 243

 Score = 71.2 bits (173), Expect = 8e-12
 Identities = 39/61 (63%), Positives = 42/61 (67%)
 Frame = -2

Query: 555 NSSPEAKFVKDLDKVEMILQALEYEHEQGKDLDEFFPSTAGKFPTEIGQAWASEIVSRRK 376
           NSSPEAK VKD DKVE+ILQALEYE               GKF T IG+AWASEIVSRR+
Sbjct: 195 NSSPEAKVVKDFDKVELILQALEYEQ--------------GKFQTNIGKAWASEIVSRRR 240

Query: 375 K 373
           K
Sbjct: 241 K 241

>gb|AAH03357.1|AAH03357 Similar to CGI-130 protein [Homo sapiens]
          Length = 204

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 38/75 (50%), Positives = 46/75 (60%), Gaps = 6/75 (8%)
 Frame = -2

Query: 552 SSPEAKFVKDLDKVEMILQALEY---EHEQGKDLDEFFPSTAGKFPTEIGQAWASEIVSR 382
           SS EAKFVK LD+ EMILQA EY   EH+ G+ L +F+ STAGKF         SE+ + 
Sbjct: 132 SSAEAKFVKQLDQCEMILQASEYEDLEHKPGR-LQDFYDSTAGKFNHPEIVQLVSELEAE 190

Query: 381 RKKTN---GSSHPHS 346
           R  TN    +S PHS
Sbjct: 191 R-STNIAAAASEPHS 204

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,169,186
Number of Sequences: 1393205
Number of extensions: 10219959
Number of successful extensions: 23112
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 22544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23099
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MFB015g11_f BP035053 1 568 2 SPD081d06_f BP050460 8 528 3 GNf025h04 BP069205 9 174

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