Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008435A_C01 KMC008435A_c01
(503 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187740.1| integral membrane protein, putative; protein id... 80 2e-14
ref|NP_196201.1| phosphate/phosphoenolpyruvate translocator prot... 77 8e-14
gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocat... 77 8e-14
ref|NP_187640.1| unknown protein; protein id: At3g10290.1 [Arabi... 64 1e-09
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p... 63 2e-09
>ref|NP_187740.1| integral membrane protein, putative; protein id: At3g11320.1
[Arabidopsis thaliana]
gi|12321869|gb|AAG50965.1|AC073395_7 integral membrane
protein, putative; 85705-84183 [Arabidopsis thaliana]
Length = 344
Score = 79.7 bits (195), Expect = 2e-14
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 503 KGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKRSK 375
KGAVAVVVSILIFRNPVSVTGM+GYSLTV GV+LYSEAKKRSK
Sbjct: 302 KGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRSK 344
>ref|NP_196201.1| phosphate/phosphoenolpyruvate translocator protein-like; protein
id: At5g05820.1 [Arabidopsis thaliana]
gi|9759107|dbj|BAB09676.1| phosphate/phosphoenolpyruvate
translocator protein-like [Arabidopsis thaliana]
Length = 307
Score = 77.4 bits (189), Expect = 8e-14
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = -1
Query: 503 KGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKRSK 375
KGAVAVVVSILIF+NPVSVTGM+GYSLTV GV+LYSEAKKR+K
Sbjct: 264 KGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKKRNK 306
>gb|AAO16996.1| Putative phosphate/phosphoenolpyruvate translocator protein [Oryza
sativa (japonica cultivar-group)]
Length = 322
Score = 77.4 bits (189), Expect = 8e-14
Identities = 37/43 (86%), Positives = 43/43 (99%)
Frame = -1
Query: 503 KGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKRSK 375
KGAVAVVVSILIFRNPVSVTGM+GY+LTV+GV+LYSE+KKR+K
Sbjct: 279 KGAVAVVVSILIFRNPVSVTGMLGYTLTVIGVILYSESKKRNK 321
>ref|NP_187640.1| unknown protein; protein id: At3g10290.1 [Arabidopsis thaliana]
gi|6056196|gb|AAF02813.1|AC009400_9 unknown protein
[Arabidopsis thaliana]
Length = 355
Score = 63.5 bits (153), Expect = 1e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -1
Query: 503 KGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKR 381
KGAVAVV+SIL+FRNPV+V G+ GYS+TVLGVV Y E K+R
Sbjct: 313 KGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKRR 353
>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 62.8 bits (151), Expect = 2e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -1
Query: 503 KGAVAVVVSILIFRNPVSVTGMMGYSLTVLGVVLYSEAKKR 381
KGAVAVV+SILIF+NPV+V G+ GYS+TVLGVV Y E K+R
Sbjct: 267 KGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYGETKRR 307
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,545,687
Number of Sequences: 1393205
Number of extensions: 8197706
Number of successful extensions: 17712
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 17337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17704
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
