Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008188A_C01 KMC008188A_c01
(1127 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB62566.1| OSJNBa0089K24.24 [Oryza sativa (japonica cultiva... 399 e-110
ref|NP_197506.1| putative protein; protein id: At5g20060.1, supp... 390 e-107
ref|NP_188186.1| putative lysophospholipase; protein id: At3g156... 347 2e-94
ref|NP_175679.1| unknown protein; protein id: At1g52700.1 [Arabi... 291 1e-77
gb|AAD55595.1|AC008016_5 F6D8.5 [Arabidopsis thaliana] 262 8e-69
>dbj|BAB62566.1| OSJNBa0089K24.24 [Oryza sativa (japonica cultivar-group)]
Length = 257
Score = 399 bits (1026), Expect = e-110
Identities = 184/247 (74%), Positives = 211/247 (84%)
Frame = +3
Query: 105 SFTAPSLVSAGARRAFEYGRTYVVRPKGKHQATIVWLHGLGDNGASWSQLLETLALPNIK 284
SF S V++G + EYGRT+VVRPKG H+ATIVWLHGLGDNGASWSQLLETL LPNIK
Sbjct: 3 SFGGTSSVASGGGKRLEYGRTHVVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIK 62
Query: 285 WICPTAPTQPISLFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIKLG 464
WICPTAPT+P+++FGGFPSTAWFDV DLSEDAPDD+EGLDASAAHVANLLSTEPADIKLG
Sbjct: 63 WICPTAPTRPVAVFGGFPSTAWFDVADLSEDAPDDVEGLDASAAHVANLLSTEPADIKLG 122
Query: 465 VGGFSMGAATALYSASCFTSGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGLDEAT 644
VGGFSMGAATALYSA+C+ GKYGNGNPYP NLS +VGLSGWLPCA++L NK++ EA
Sbjct: 123 VGGFSMGAATALYSATCYAHGKYGNGNPYPVNLSVSVGLSGWLPCARSLKNKIESSQEAA 182
Query: 645 RRAQSLPILMCHGKGDDVVPYTFGEKSSKCLSSTGFQDVTFKSYTGLGHYPVPEEMDELC 824
++A S+P+L+CHGK DDVV Y GEKS+ L +TGF +V FKSY LGHY VPEEMDE+C
Sbjct: 183 QKASSIPLLLCHGKADDVVLYKHGEKSADALKTTGFSNVVFKSYNRLGHYTVPEEMDEVC 242
Query: 825 AWLASKL 845
WL + L
Sbjct: 243 KWLTANL 249
>ref|NP_197506.1| putative protein; protein id: At5g20060.1, supported by cDNA:
42475. [Arabidopsis thaliana] gi|21593747|gb|AAM65714.1|
putative lysophospholipase [Arabidopsis thaliana]
gi|23306356|gb|AAN17405.1| putative protein [Arabidopsis
thaliana] gi|24899695|gb|AAN65062.1| putative protein
[Arabidopsis thaliana]
Length = 252
Score = 390 bits (1002), Expect = e-107
Identities = 181/235 (77%), Positives = 207/235 (88%)
Frame = +3
Query: 141 RRAFEYGRTYVVRPKGKHQATIVWLHGLGDNGASWSQLLETLALPNIKWICPTAPTQPIS 320
RRA E+G+T+VVRPKGKHQATIVWLHGLGDNG+SWSQLLETL LPNIKWICPTAP+QPIS
Sbjct: 15 RRAVEFGKTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPSQPIS 74
Query: 321 LFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATAL 500
LFGGFPSTAWFDV D++ED PDD+EGLD +AAHVANLLS EPADIKLGVGGFSMGAAT+L
Sbjct: 75 LFGGFPSTAWFDVVDINEDGPDDMEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSL 134
Query: 501 YSASCFTSGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGLDEATRRAQSLPILMCH 680
YSA+CF GKYGNGNPYP NLSA +GLSGWLPCAKTL+ KL+ ++ RA SLPI++CH
Sbjct: 135 YSATCFALGKYGNGNPYPINLSAIIGLSGWLPCAKTLAGKLEE-EQIKNRAASLPIVVCH 193
Query: 681 GKGDDVVPYTFGEKSSKCLSSTGFQDVTFKSYTGLGHYPVPEEMDELCAWLASKL 845
GK DDVVP+ FGEKSS+ L S GF+ VTFK Y+ LGH+ +P+E+DELCAWL S L
Sbjct: 194 GKADDVVPFKFGEKSSQALLSNGFKKVTFKPYSALGHHTIPQELDELCAWLTSTL 248
>ref|NP_188186.1| putative lysophospholipase; protein id: At3g15650.1 [Arabidopsis
thaliana] gi|11994337|dbj|BAB02296.1|
lysophospholipase-like protein [Arabidopsis thaliana]
Length = 255
Score = 347 bits (891), Expect = 2e-94
Identities = 162/249 (65%), Positives = 198/249 (79%), Gaps = 1/249 (0%)
Frame = +3
Query: 102 MSFTAPSLVSAG-ARRAFEYGRTYVVRPKGKHQATIVWLHGLGDNGASWSQLLETLALPN 278
MS++ S+ S + R +E+GRTYVVRPKGKHQATIVWLHGLGDNG+S SQLLE+L LPN
Sbjct: 1 MSYSRQSMGSGSRSTRGYEFGRTYVVRPKGKHQATIVWLHGLGDNGSSSSQLLESLPLPN 60
Query: 279 IKWICPTAPTQPISLFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIK 458
IKWICPTAP++P+SL GGFP TAWFDVG++SED DD+EGLDASAAH+ANLLS EP D+K
Sbjct: 61 IKWICPTAPSRPVSLLGGFPCTAWFDVGEISEDLHDDIEGLDASAAHIANLLSAEPTDVK 120
Query: 459 LGVGGFSMGAATALYSASCFTSGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGLDE 638
+G+GGFSMGAA ALYS +C+ G+YG G+ Y NL A VGLSGWLP ++L +K++ +E
Sbjct: 121 VGIGGFSMGAAIALYSTTCYALGRYGTGHAYTINLRATVGLSGWLPGWRSLRSKIESSNE 180
Query: 639 ATRRAQSLPILMCHGKGDDVVPYTFGEKSSKCLSSTGFQDVTFKSYTGLGHYPVPEEMDE 818
RRA S+PIL+ HG DDVVPY FGEKS+ L+ GF+ FK Y GLGHY VP+EMDE
Sbjct: 181 VARRAASIPILLAHGTSDDVVPYRFGEKSAHSLAMAGFRQTMFKPYEGLGHYTVPKEMDE 240
Query: 819 LCAWLASKL 845
+ WL S+L
Sbjct: 241 VVHWLVSRL 249
>ref|NP_175679.1| unknown protein; protein id: At1g52700.1 [Arabidopsis thaliana]
Length = 223
Score = 291 bits (746), Expect = 1e-77
Identities = 144/249 (57%), Positives = 175/249 (69%), Gaps = 1/249 (0%)
Frame = +3
Query: 102 MSFTAPSLVSAGAR-RAFEYGRTYVVRPKGKHQATIVWLHGLGDNGASWSQLLETLALPN 278
MS++ S+ S R +E+GRTYVVRPKGKHQAT+VWLHGLGDNG+S SQL+++L LPN
Sbjct: 1 MSYSHQSMGSGSRNARGYEFGRTYVVRPKGKHQATLVWLHGLGDNGSSSSQLMDSLHLPN 60
Query: 279 IKWICPTAPTQPISLFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIK 458
IKWICPTAP++P++ GGF TAWFDVG++SED DDLEGLDASA+H+ANLLS+EPAD+
Sbjct: 61 IKWICPTAPSRPVTSLGGFTCTAWFDVGEISEDGHDDLEGLDASASHIANLLSSEPADV- 119
Query: 459 LGVGGFSMGAATALYSASCFTSGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGLDE 638
G+GGFSMGAA +LYSA+C+ G+YG G+ YP NL A VGLSGWLP
Sbjct: 120 -GIGGFSMGAAISLYSATCYALGRYGTGHAYPINLQAVVGLSGWLP-------------- 164
Query: 639 ATRRAQSLPILMCHGKGDDVVPYTFGEKSSKCLSSTGFQDVTFKSYTGLGHYPVPEEMDE 818
DDVVPY FGEKS++ L GF+ FK Y GLGHY VP EMDE
Sbjct: 165 ----------------ADDVVPYRFGEKSAQSLGMAGFRLAMFKPYEGLGHYTVPREMDE 208
Query: 819 LCAWLASKL 845
+ WL + L
Sbjct: 209 VVHWLTTML 217
>gb|AAD55595.1|AC008016_5 F6D8.5 [Arabidopsis thaliana]
Length = 195
Score = 262 bits (669), Expect = 8e-69
Identities = 131/228 (57%), Positives = 159/228 (69%), Gaps = 1/228 (0%)
Frame = +3
Query: 102 MSFTAPSLVSAGAR-RAFEYGRTYVVRPKGKHQATIVWLHGLGDNGASWSQLLETLALPN 278
MS++ S+ S R +E+GRTYVVRPKGKHQAT+VWLHGLGDNG+S SQL+++L LPN
Sbjct: 1 MSYSHQSMGSGSRNARGYEFGRTYVVRPKGKHQATLVWLHGLGDNGSSSSQLMDSLHLPN 60
Query: 279 IKWICPTAPTQPISLFGGFPSTAWFDVGDLSEDAPDDLEGLDASAAHVANLLSTEPADIK 458
IKWICPTAP++P++ GGF TAWFDVG++SED DDLEGLDASA+H+ANLLS+EPAD
Sbjct: 61 IKWICPTAPSRPVTSLGGFTCTAWFDVGEISEDGHDDLEGLDASASHIANLLSSEPAD-- 118
Query: 459 LGVGGFSMGAATALYSASCFTSGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGLDE 638
G+GGFSMGAA +LYSA+C+ G+YG G+ YP NL A VGLSGWLP
Sbjct: 119 -GIGGFSMGAAISLYSATCYALGRYGTGHAYPINLQAVVGLSGWLP-------------- 163
Query: 639 ATRRAQSLPILMCHGKGDDVVPYTFGEKSSKCLSSTGFQDVTFKSYTG 782
DDVVPY FGEKS++ L GF+ FK Y G
Sbjct: 164 ----------------ADDVVPYRFGEKSAQSLGMAGFRLAMFKPYEG 195
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,028,098,086
Number of Sequences: 1393205
Number of extensions: 24215667
Number of successful extensions: 70630
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 66121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70317
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 68634655500
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
