Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC008012A_C03 KMC008012A_c03
(874 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL05427.1| putative vacuolar acid invertase [Prunus cerasus] 189 4e-47
gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus sinensis] 184 2e-45
sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme ... 174 2e-42
pir||S37592 beta-fructofuranosidase (EC 3.2.1.26) isozyme I clas... 174 2e-42
pir||S37590 beta-fructofuranosidase (EC 3.2.1.26) isozyme I clas... 174 2e-42
>gb|AAL05427.1| putative vacuolar acid invertase [Prunus cerasus]
Length = 636
Score = 189 bits (481), Expect = 4e-47
Identities = 93/131 (70%), Positives = 108/131 (81%)
Frame = -2
Query: 873 LAIADDALSAQTPIYFRLSDTSLGNSTTFFCVDETRSSEASDVAKPVYGSQVPVFSDEKL 694
L IAD+ LS TP+YFR+S+++ G+ TT FC DETRSS+A +V K VYG QVPV E
Sbjct: 506 LVIADETLSELTPVYFRVSNSTDGDITTHFCADETRSSKAPEVYKTVYGDQVPVLDGETY 565
Query: 693 SMRVLVDHSIIESFAQEGRTVISGRVYPTEAIYGAARLFLFNNATGINIKASLKIWQLNS 514
S RVLVDHSI+ESFAQ GRTVI+ R+YPTEAIYGAARLFLFNNATG+N+KA+LKIWQLNS
Sbjct: 566 SARVLVDHSIVESFAQGGRTVIASRIYPTEAIYGAARLFLFNNATGVNVKATLKIWQLNS 625
Query: 513 AFIGPFPFDQI 481
AFI PFP QI
Sbjct: 626 AFIHPFPLHQI 636
>gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus sinensis]
Length = 588
Score = 184 bits (467), Expect = 2e-45
Identities = 92/131 (70%), Positives = 109/131 (82%)
Frame = -2
Query: 873 LAIADDALSAQTPIYFRLSDTSLGNSTTFFCVDETRSSEASDVAKPVYGSQVPVFSDEKL 694
L A D+LS TPI+FR S+T+ G +T +FC DETRSS A DV K V+GS+VPV EKL
Sbjct: 459 LVNAHDSLSELTPIFFRSSNTTKGTNT-YFCADETRSSLAPDVFKQVHGSKVPVIQGEKL 517
Query: 693 SMRVLVDHSIIESFAQEGRTVISGRVYPTEAIYGAARLFLFNNATGINIKASLKIWQLNS 514
SMR+LVDHSI+ESF Q GRTVI+ R+YPT+AIYGAARLFLFNNATG+N+KA+LKIW+LNS
Sbjct: 518 SMRILVDHSIVESFGQGGRTVITSRIYPTKAIYGAARLFLFNNATGVNVKATLKIWRLNS 577
Query: 513 AFIGPFPFDQI 481
AFI PFP DQI
Sbjct: 578 AFIHPFPLDQI 588
>sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I precursor
(Sucrose-6-phosphate hydrolase) (Invertase) (Saccharase)
gi|480997|pir||S37591 beta-fructofuranosidase (EC
3.2.1.26) isozyme I class 1, soluble - carrot
gi|407055|emb|CAA53097.1| beta-fructofuranosidase
[Daucus carota] gi|4454117|emb|CAA77267.1|
beta-fructofuranosidase, isoform I [Daucus carota]
Length = 661
Score = 174 bits (440), Expect = 2e-42
Identities = 84/131 (64%), Positives = 103/131 (78%)
Frame = -2
Query: 873 LAIADDALSAQTPIYFRLSDTSLGNSTTFFCVDETRSSEASDVAKPVYGSQVPVFSDEKL 694
L +ADD LS TP+YF ++ GN+ T+FC D++RSS ASDV K VYGS VPV E L
Sbjct: 531 LVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLHGESL 590
Query: 693 SMRVLVDHSIIESFAQEGRTVISGRVYPTEAIYGAARLFLFNNATGINIKASLKIWQLNS 514
SMR+LVDHSI+ESFAQ GRTVI+ RVYPT AIY AAR+FLFNNATG+++ AS+K WQ+ S
Sbjct: 591 SMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMAS 650
Query: 513 AFIGPFPFDQI 481
A + PFPFDQ+
Sbjct: 651 ATLKPFPFDQL 661
>pir||S37592 beta-fructofuranosidase (EC 3.2.1.26) isozyme I class 3 precursor,
soluble - carrot gi|407049|emb|CAA53099.1|
beta-fructofuranosidase [Daucus carota]
Length = 661
Score = 174 bits (440), Expect = 2e-42
Identities = 84/131 (64%), Positives = 103/131 (78%)
Frame = -2
Query: 873 LAIADDALSAQTPIYFRLSDTSLGNSTTFFCVDETRSSEASDVAKPVYGSQVPVFSDEKL 694
L +ADD LS TP+YF ++ GN+ T+FC D++RSS ASDV K VYGS VPV E L
Sbjct: 531 LVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLPGESL 590
Query: 693 SMRVLVDHSIIESFAQEGRTVISGRVYPTEAIYGAARLFLFNNATGINIKASLKIWQLNS 514
SMR+LVDHSI+ESFAQ GRTVI+ RVYPT AIY AAR+FLFNNATG+++ AS+K WQ+ S
Sbjct: 591 SMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMAS 650
Query: 513 AFIGPFPFDQI 481
A + PFPFDQ+
Sbjct: 651 ATLKPFPFDQL 661
>pir||S37590 beta-fructofuranosidase (EC 3.2.1.26) isozyme I class 2 precursor,
soluble - carrot gi|407078|emb|CAA53098.1|
beta-fructofuranosidase [Daucus carota]
Length = 661
Score = 174 bits (440), Expect = 2e-42
Identities = 84/131 (64%), Positives = 103/131 (78%)
Frame = -2
Query: 873 LAIADDALSAQTPIYFRLSDTSLGNSTTFFCVDETRSSEASDVAKPVYGSQVPVFSDEKL 694
L +ADD LS TP+YF ++ GN+ T+FC D++RSS ASDV K VYGS VPV E L
Sbjct: 531 LVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGSDVPVLPGESL 590
Query: 693 SMRVLVDHSIIESFAQEGRTVISGRVYPTEAIYGAARLFLFNNATGINIKASLKIWQLNS 514
SMR+LVDHSI+ESFAQ GRTVI+ RVYPT AIY AAR+FLFNNATG+++ AS+K WQ+ S
Sbjct: 591 SMRLLVDHSIVESFAQGGRTVITSRVYPTRAIYSAARVFLFNNATGVSVTASVKAWQMAS 650
Query: 513 AFIGPFPFDQI 481
A + PFPFDQ+
Sbjct: 651 ATLKPFPFDQL 661
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 692,295,301
Number of Sequences: 1393205
Number of extensions: 14350758
Number of successful extensions: 27202
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 26424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27126
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46824663816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
