Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007922A_C01 KMC007922A_c01
(572 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD30860.1| GCN2 homologue [Arabidopsis thaliana] 139 2e-32
ref|NP_191500.1| protein kinase like; protein id: At3g59410.1 [A... 139 2e-32
gb|AAO51120.1| similar to Homo sapiens (Human). Histidyl-tRNA sy... 47 1e-04
gb|AAH04665.1| Unknown (protein for IMAGE:3498454) [Mus musculus] 47 2e-04
ref|NP_036340.1| histidyl-tRNA synthetase-like; HARS-related; hi... 47 2e-04
>emb|CAD30860.1| GCN2 homologue [Arabidopsis thaliana]
Length = 1241
Score = 139 bits (351), Expect = 2e-32
Identities = 68/93 (73%), Positives = 80/93 (85%), Gaps = 2/93 (2%)
Frame = -2
Query: 571 ERMELVAELWEENFKAEFVPTHDPSLTEQYEYANEHDIKCLVIMTDTGFSLT--DSVKVR 398
+RMELVAELWE++ KAEFVPT DPSLTEQYEYANEH+IKCLVI+T++G + + VKVR
Sbjct: 1148 QRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVKVR 1207
Query: 397 HLELKKEKSIERKNLVKFLSDAMATQFRNPSIW 299
HLELKKEK + R+ LVKFL DAMA QFRNPS+W
Sbjct: 1208 HLELKKEKVVGREELVKFLLDAMAVQFRNPSVW 1240
>ref|NP_191500.1| protein kinase like; protein id: At3g59410.1 [Arabidopsis thaliana]
gi|11358716|pir||T49009 protein kinase like - Arabidopsis
thaliana gi|7801691|emb|CAB91611.1| protein kinase like
[Arabidopsis thaliana]
Length = 1271
Score = 139 bits (351), Expect = 2e-32
Identities = 68/93 (73%), Positives = 80/93 (85%), Gaps = 2/93 (2%)
Frame = -2
Query: 571 ERMELVAELWEENFKAEFVPTHDPSLTEQYEYANEHDIKCLVIMTDTGFSLT--DSVKVR 398
+RMELVAELWE++ KAEFVPT DPSLTEQYEYANEH+IKCLVI+T++G + + VKVR
Sbjct: 1178 QRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVKVR 1237
Query: 397 HLELKKEKSIERKNLVKFLSDAMATQFRNPSIW 299
HLELKKEK + R+ LVKFL DAMA QFRNPS+W
Sbjct: 1238 HLELKKEKVVGREELVKFLLDAMAVQFRNPSVW 1270
>gb|AAO51120.1| similar to Homo sapiens (Human). Histidyl-tRNA synthetase (EC
6.1.1.21) (Histidine--tRNA ligase) (HisRS)
[Dictyostelium discoideum]
Length = 481
Score = 47.4 bits (111), Expect = 1e-04
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = -2
Query: 571 ERMELVAELWEENFKAEFVPTHDPSLTEQYEYANEHDIKCLVIMTDTGFSLTDSVKVRHL 392
ER+ +V+ELW+ AEF +P L Q A+E +I ++I+ + T+S+ V+ +
Sbjct: 397 ERLAIVSELWKAGINAEFSYKVNPKLPAQLNTADESNIPLIIIIGKSEVE-TNSLSVKTM 455
Query: 391 ELKKEKSIERKNLVKFLSDAMAT 323
+K+ SIER N + + ++T
Sbjct: 456 HDRKQVSIERSNFTVKIKEILST 478
>gb|AAH04665.1| Unknown (protein for IMAGE:3498454) [Mus musculus]
Length = 100
Score = 47.0 bits (110), Expect = 2e-04
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = -2
Query: 571 ERMELVAELWEENFKAEFVPTHDPSLTEQYEYANEHDIKCLVIMTDTGFSLTDSVKVRHL 392
ER++++AELW+ KAE + ++P L Q Y + DI +VI+ + + +K+R +
Sbjct: 18 ERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERN-EGVIKLRSV 76
Query: 391 ELKKEKSIERKNLV 350
++E +I R++LV
Sbjct: 77 ASREEVTINRESLV 90
>ref|NP_036340.1| histidyl-tRNA synthetase-like; HARS-related; histidine-tRNA ligase
homolog; hisRS; histidine translase [Homo sapiens]
gi|1351156|sp|P49590|SYHH_HUMAN Histidyl-tRNA synthetase
homolog (Histidine--tRNA ligase homolog) (HisRS)
gi|7437808|pir||I38915 histidyl-tRNA synthetase homolog
- human gi|899109|gb|AAA73974.1| histidyl-tRNA
synthetase homologue gi|14043376|gb|AAH07680.1|AAH07680
Similar to histidyl tRNA synthetase [Homo sapiens]
gi|15929049|gb|AAH14982.1|AAH14982 histidyl-tRNA
synthetase-like [Homo sapiens]
Length = 506
Score = 47.0 bits (110), Expect = 2e-04
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = -2
Query: 571 ERMELVAELWEENFKAEFVPTHDPSLTEQYEYANEHDIKCLVIMTDTGFSLTDSVKVRHL 392
ER++L+AELW+ KAE + ++P L Q Y I +VI+ + +K+R +
Sbjct: 424 ERLKLIAELWDSGIKAEMLYKNNPKLLTQLHYCESTGIPLVVIIGEQELK-EGVIKIRSV 482
Query: 391 ELKKEKSIERKNLV 350
++E +I+R+N V
Sbjct: 483 ASREEVAIKRENFV 496
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,882,859
Number of Sequences: 1393205
Number of extensions: 8025083
Number of successful extensions: 20878
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 20285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20858
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
