Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007742A_C01 KMC007742A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA67107.1| mitochondrial energy transfer protein [Solanum t... 160 2e-48
ref|NP_194966.1| mitochondrial carrier protein family; protein i... 146 5e-44
sp|P29518|BT1_MAIZE Brittle-1 protein, chloroplast precursor gi|... 114 7e-25
ref|NP_188659.1| mitochondrial carrier protein family; protein i... 75 8e-16
gb|AAM61623.1| mitochondrial carrier protein, putative [Arabidop... 75 8e-16
>emb|CAA67107.1| mitochondrial energy transfer protein [Solanum tuberosum]
Length = 385
Score = 160 bits (405), Expect(2) = 2e-48
Identities = 78/91 (85%), Positives = 86/91 (93%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARKH 408
+IGVIPYAATNYFAYD+LRK YRK+FK+EKIGN ETLLIGSAAGAISS ATFPLEVARKH
Sbjct: 259 VIGVIPYAATNYFAYDSLRKAYRKIFKEEKIGNIETLLIGSAAGAISSTATFPLEVARKH 318
Query: 407 MQVGALSGRQIYKNVVHALVSILEQEGIQGL 315
MQVGA+SGR +YKNV+HALVSILEQ+GI GL
Sbjct: 319 MQVGAVSGRAVYKNVIHALVSILEQDGIHGL 349
Score = 54.3 bits (129), Expect(2) = 2e-48
Identities = 23/24 (95%), Positives = 24/24 (99%)
Frame = -1
Query: 309 EGLGPSCMKLVPAAGISFMCYEAC 238
+GLGPSCMKLVPAAGISFMCYEAC
Sbjct: 351 KGLGPSCMKLVPAAGISFMCYEAC 374
Score = 45.1 bits (105), Expect = 7e-04
Identities = 29/88 (32%), Positives = 46/88 (51%), Gaps = 1/88 (1%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTY-RKVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARK 411
+I V P A F YDT+ K K +Q KI +L+ G+ AG S+ T+PLE+ +
Sbjct: 164 VIRVAPSKAVELFVYDTVNKNLSSKPGEQSKIPIPASLVAGACAGVSSTLLTYPLELVKT 223
Query: 410 HMQVGALSGRQIYKNVVHALVSILEQEG 327
+ + R +Y ++ A V IL++ G
Sbjct: 224 RLTI----QRGVYNGLLDAFVKILKEGG 247
Score = 32.0 bits (71), Expect = 5.9
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = -2
Query: 479 LLIGSAAGAISSPATFPLEVARKHMQVGALSGRQIYKNVVHALVSILEQEGIQGL 315
L+ G+ AGAIS A PL R H+ VG+ SG + SI++ EG GL
Sbjct: 107 LISGAIAGAISRTAVAPLGTIRTHLMVGS-SGH----SSTEVFNSIMKTEGWTGL 156
>ref|NP_194966.1| mitochondrial carrier protein family; protein id: At4g32400.1,
supported by cDNA: 12232., supported by cDNA:
gi_13937180, supported by cDNA: gi_18491120 [Arabidopsis
thaliana] gi|7484793|pir||T05350 adenylate translocator
brittle-1 homolog F8B4.100 - Arabidopsis thaliana
gi|4049342|emb|CAA22567.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
gi|7270144|emb|CAB79957.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
gi|13937181|gb|AAK50084.1|AF372944_1 AT4g32400/F8B4_100
[Arabidopsis thaliana] gi|18491121|gb|AAL69529.1|
AT4g32400/F8B4_100 [Arabidopsis thaliana]
gi|21537158|gb|AAM61499.1| adenylate translocator
(brittle-1)-like protein [Arabidopsis thaliana]
Length = 392
Score = 146 bits (369), Expect(2) = 5e-44
Identities = 72/90 (80%), Positives = 80/90 (88%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARKH 408
LIGV+PYAATNYFAYD+LRK YR KQEKIGN ETLLIGS AGA+SS ATFPLEVARKH
Sbjct: 266 LIGVVPYAATNYFAYDSLRKAYRSFSKQEKIGNIETLLIGSLAGALSSTATFPLEVARKH 325
Query: 407 MQVGALSGRQIYKNVVHALVSILEQEGIQG 318
MQVGA+SGR +YKN++HALV+ILE EGI G
Sbjct: 326 MQVGAVSGRVVYKNMLHALVTILEHEGILG 355
Score = 53.1 bits (126), Expect(2) = 5e-44
Identities = 22/24 (91%), Positives = 24/24 (99%)
Frame = -1
Query: 309 EGLGPSCMKLVPAAGISFMCYEAC 238
+GLGPSC+KLVPAAGISFMCYEAC
Sbjct: 358 KGLGPSCLKLVPAAGISFMCYEAC 381
Score = 42.7 bits (99), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (49%), Gaps = 1/88 (1%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQE-KIGNFETLLIGSAAGAISSPATFPLEVARK 411
+I V P A F ++T+ K QE KI +LL G+ AG + T+PLE+ +
Sbjct: 171 VIRVAPARAVELFVFETVNKKLSPPHGQESKIPIPASLLAGACAGVSQTLLTYPLELVKT 230
Query: 410 HMQVGALSGRQIYKNVVHALVSILEQEG 327
+ + R +YK + A + I+ +EG
Sbjct: 231 RLTIQ----RGVYKGIFDAFLKIIREEG 254
Score = 32.7 bits (73), Expect = 3.5
Identities = 23/66 (34%), Positives = 33/66 (49%), Gaps = 4/66 (6%)
Frame = -2
Query: 500 KIGN--FETLLIGSAAGAISSPATFPLEVARKHMQVGA--LSGRQIYKNVVHALVSILEQ 333
KI N LL G+ AGA+S PLE R H+ VG+ S +++ + I++
Sbjct: 105 KIANPSLRRLLSGAVAGAVSRTVVAPLETIRTHLMVGSGGNSSTEVFSD-------IMKH 157
Query: 332 EGIQGL 315
EG GL
Sbjct: 158 EGWTGL 163
>sp|P29518|BT1_MAIZE Brittle-1 protein, chloroplast precursor gi|82676|pir||JQ1459 Bt1
protein precursor - maize gi|168426|gb|AAA33438.1|
brittle-1 protein
Length = 436
Score = 114 bits (286), Expect = 7e-25
Identities = 65/139 (46%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQEK---IGNFETLLIGSAAGAISSPATFPLEVA 417
LIGV+PYAA N++AY+TL++ YR+ + +G TLLIGSAAGAI+S ATFPLEVA
Sbjct: 291 LIGVVPYAACNFYAYETLKRLYRRATGRRPGADVGPVATLLIGSAAGAIASSATFPLEVA 350
Query: 416 RKHMQVGALSGRQIYKNVVHALVSILEQEGIQGLI*RDWDLVA*SWCR--PPESLSCVMK 243
RK MQVGA+ GRQ+Y+NV+HA+ IL++EG GL + + S + P ++ +
Sbjct: 351 RKQMQVGAVGGRQVYQNVLHAIYCILKKEGAGGL----YRGLGPSCIKLMPAAGIAFMCY 406
Query: 242 HA-RRILIDDDEKQ*DDES 189
A ++IL+D ++++ +DE+
Sbjct: 407 EACKKILVDKEDEEEEDEA 425
Score = 45.8 bits (107), Expect(2) = 2e-05
Identities = 29/88 (32%), Positives = 45/88 (50%), Gaps = 1/88 (1%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYR-KVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARK 411
++ V P A +F YDT +K K + KI L+ G+ AG S+ T+P+E+ +
Sbjct: 196 VLRVAPSKAIEHFTYDTAKKFLTPKGDEPPKIPIPTPLVAGALAGFASTLCTYPMELIKT 255
Query: 410 HMQVGALSGRQIYKNVVHALVSILEQEG 327
+ + + +Y NV HA V IL EG
Sbjct: 256 RVTIE----KDVYDNVAHAFVKILRDEG 279
Score = 23.5 bits (49), Expect(2) = 2e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 324 PRPHIEGLGPSCMKLVPAAGISFMCYE 244
P GL PS + +VP A +F YE
Sbjct: 280 PSELYRGLTPSLIGVVPYAACNFYAYE 306
>ref|NP_188659.1| mitochondrial carrier protein family; protein id: At3g20240.1,
supported by cDNA: 126140. [Arabidopsis thaliana]
gi|9293980|dbj|BAB01883.1| contains similarity to
membrane carrier/translocators~gene_id:MAL21.26
[Arabidopsis thaliana] gi|29029108|gb|AAO64933.1|
At3g20240 [Arabidopsis thaliana]
Length = 348
Score = 74.7 bits (182), Expect(2) = 8e-16
Identities = 37/96 (38%), Positives = 61/96 (63%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARKH 408
L+G++PY+ YF YD ++ +Y K ++ + E L++G+ AG +S +FPLEVARK
Sbjct: 221 LVGMLPYSTCYYFMYDKMKTSYCKSKNKKALSRPEMLVLGALAGLTASTISFPLEVARKR 280
Query: 407 MQVGALSGRQIYKNVVHALVSILEQEGIQGLI*RDW 300
+ VGAL G + N+ A+ ++++EG+ GL R W
Sbjct: 281 LMVGALKG-ECPPNMAAAIAEVVKKEGVMGLY-RGW 314
Score = 30.4 bits (67), Expect(2) = 8e-16
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = -1
Query: 306 GLGPSCMKLVPAAGISFMCYEA 241
G G SC+K++P++GI+++ YEA
Sbjct: 313 GWGASCLKVMPSSGITWVFYEA 334
>gb|AAM61623.1| mitochondrial carrier protein, putative [Arabidopsis thaliana]
Length = 346
Score = 74.7 bits (182), Expect(2) = 8e-16
Identities = 37/96 (38%), Positives = 61/96 (63%)
Frame = -2
Query: 587 LIGVIPYAATNYFAYDTLRKTYRKVFKQEKIGNFETLLIGSAAGAISSPATFPLEVARKH 408
L+G++PY+ YF YD ++ +Y K ++ + E L++G+ AG +S +FPLEVARK
Sbjct: 219 LVGMLPYSTCYYFMYDKMKTSYCKSKNKKALSRPEMLVLGALAGLTASTISFPLEVARKR 278
Query: 407 MQVGALSGRQIYKNVVHALVSILEQEGIQGLI*RDW 300
+ VGAL G + N+ A+ ++++EG+ GL R W
Sbjct: 279 LMVGALKG-ECPPNMAAAIAEVVKKEGVMGLY-RGW 312
Score = 30.4 bits (67), Expect(2) = 8e-16
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = -1
Query: 306 GLGPSCMKLVPAAGISFMCYEA 241
G G SC+K++P++GI+++ YEA
Sbjct: 311 GWGASCLKVMPSSGITWVFYEA 332
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,041,905
Number of Sequences: 1393205
Number of extensions: 11072415
Number of successful extensions: 27836
Number of sequences better than 10.0: 397
Number of HSP's better than 10.0 without gapping: 26575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27748
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
