Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007688A_C01 KMC007688A_c01
(640 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177388.1| hypothetical protein; protein id: At1g72440.1 [... 54 2e-06
gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum] g... 53 4e-06
sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN PRECURSOR gi|72... 50 2e-05
pir||A54523 histidine-rich protein - Plasmodium lophurae (fragme... 47 2e-04
ref|NP_732342.2| CG31122-PA [Drosophila melanogaster] gi|2838135... 47 2e-04
>ref|NP_177388.1| hypothetical protein; protein id: At1g72440.1 [Arabidopsis thaliana]
gi|25350651|pir||E96748 hypothetical protein T10D10.9
[imported] - Arabidopsis thaliana
gi|12325271|gb|AAG52578.1|AC016529_9 hypothetical
protein; 39633-44904 [Arabidopsis thaliana]
Length = 1056
Score = 53.5 bits (127), Expect = 2e-06
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = -3
Query: 617 DEGSDDEVEGSDDDNDIQIGDVDDASDEEEEDQVSKRKRKRKSGGKSAASPFASYEEFEH 438
D D ++ +DDN++ D D++ + + K+K+K K SPFAS EE++H
Sbjct: 965 DTDMDMDLIDDEDDNNVDDDGTGDGGDDDSDGDDGRSKKKKKEKRKRK-SPFASLEEYKH 1023
Query: 437 LMDNVDQNEKAPTQKKQKQKHKKTKK 360
L +DQ+EK ++ K+K + TKK
Sbjct: 1024 L---IDQDEKEDSKTKRKATSEPTKK 1046
>gb|AAM44363.1| hypothetical protein [Dictyostelium discoideum]
gi|28828387|gb|AAM09303.2| similar to Plasmodium
lophurae. Histidine-rich glycoprotein precursor
[Dictyostelium discoideum]
Length = 233
Score = 52.8 bits (125), Expect = 4e-06
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = +2
Query: 452 HNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHHHSLHHHFEE 631
H+ H HH + + P H HH HP +H HHH+ HHH HHH
Sbjct: 75 HHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHH 134
Query: 632 H 634
H
Sbjct: 135 H 135
Score = 52.0 bits (123), Expect = 7e-06
Identities = 23/74 (31%), Positives = 28/74 (37%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+P PH+ H HH + H HH H +H HHH+
Sbjct: 98 HHPHHHPHHHHHPHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHH 144
Query: 593 QLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 145 HHHHHHHHHHPHHH 158
Score = 50.1 bits (118), Expect = 3e-05
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+P PH+ H HH + + H HH H +H HHH+
Sbjct: 91 HHHHHHP---HHPHHHPHHHHHPHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHH 140
Query: 593 QLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 141 HHHHHHHHHHHHHH 154
Score = 48.5 bits (114), Expect = 7e-05
Identities = 24/65 (36%), Positives = 29/65 (43%)
Frame = +2
Query: 428 YPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHHH 607
Y LD PHN H+ H+ +P PH HH H +H HHH+ HHH
Sbjct: 40 YQLDVNNPHNPN-NNPHNPHNPNN-------NPHHPHHLHHHHHHHHHHHHHHHHHHHHH 91
Query: 608 SLHHH 622
HHH
Sbjct: 92 HHHHH 96
Score = 34.7 bits (78), Expect = 1.1
Identities = 17/45 (37%), Positives = 18/45 (39%), Gaps = 7/45 (15%)
Frame = +2
Query: 527 PLPHQRHHQHPQFEYHCHHH-------YLQLHHHSLHHHFEEHLC 640
P PH H HP H HHH + H H HHH E C
Sbjct: 173 PNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASEC 217
>sp|P04929|HRPX_PLALO HISTIDINE-RICH GLYCOPROTEIN PRECURSOR gi|72400|pir||KGZQHL
histidine-rich glycoprotein precursor - Plasmodium
lophurae gi|9999|emb|CAA25698.1| histidine-rich protein
[Plasmodium lophurae] gi|224316|prf||1101401A
protein,His rich
Length = 351
Score = 50.4 bits (119), Expect = 2e-05
Identities = 23/70 (32%), Positives = 31/70 (43%)
Frame = +2
Query: 425 HYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHH 604
H+P + PH+ + H H + P PH HH HP +H H+ HH
Sbjct: 64 HHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHH 123
Query: 605 HSLHHHFEEH 634
+ HHH EEH
Sbjct: 124 AAHHHHHEEH 133
Score = 49.3 bits (116), Expect = 4e-05
Identities = 23/75 (30%), Positives = 31/75 (40%)
Frame = +2
Query: 410 SHFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHY 589
+H H+ DA H+ + H HH + + H HH H + H HHH+
Sbjct: 254 AHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHH---DAHHHHHH 310
Query: 590 LQLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 311 HDAHHHHHHHHDAHH 325
Score = 47.8 bits (112), Expect = 1e-04
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = +2
Query: 410 SHFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHY 589
+H H+ DA H+ + H HH + HH H +H HHH+
Sbjct: 274 AHHHHHHHHDAHHHHHHHHDAHHHHHHHH-------------DAHHHHHHHDAHHHHHHH 320
Query: 590 LQLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 321 HDAHHHHHHHHDAHH 335
Score = 47.4 bits (111), Expect = 2e-04
Identities = 23/75 (30%), Positives = 29/75 (38%)
Frame = +2
Query: 410 SHFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHY 589
+H H+ DA H+ + H HH H HH H +H HHH+
Sbjct: 284 AHHHHHHHHDAHHHHHHHHDAHHHHHHHDA------------HHHHHHHHDAHHHHHHHH 331
Query: 590 LQLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 332 -DAHHHHHHHHDAHH 345
Score = 45.1 bits (105), Expect = 8e-04
Identities = 23/73 (31%), Positives = 31/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 425 HYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LD---PPLPHQRHHQHPQFEYHCHHHYLQ 595
H+ A H+ + H H + +F + L PH HH H +H HHH+
Sbjct: 135 HHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAP 194
Query: 596 LHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 195 HHHH--HHHHAPH 205
Score = 45.1 bits (105), Expect = 8e-04
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +2
Query: 425 HYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHH 604
H+ A H+ H HH + + PH HH H +H HHH+ HH
Sbjct: 178 HHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHH 237
Query: 605 HSLHHHFEEH 634
H HH H
Sbjct: 238 HHHHHGHHHH 247
Score = 44.7 bits (104), Expect = 0.001
Identities = 22/74 (29%), Positives = 27/74 (35%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H G H+ H+ H HH + H HH H +H HHH+
Sbjct: 221 HHGHHH-------HHHHHHGHHHHHHHHH-----------GHHHHHHHHHDAHHHHHHHH 262
Query: 593 QLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 263 DAHHHHHHHHDAHH 276
Score = 42.7 bits (99), Expect = 0.004
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+P PH+ H HH H+ HH H +H HH
Sbjct: 102 HHHHHHP-----PHHHHHLGHHHHHHHAAHHHH--------HEEHHHHHHAAHHHHHEEH 148
Query: 593 QLHHHSLHHH--FEEH 634
HHH+ HHH F H
Sbjct: 149 HHHHHAAHHHPWFHHH 164
Score = 42.4 bits (98), Expect = 0.005
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+ H+ H HH + + H HH H +H HHH+
Sbjct: 211 HHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGH-------HHHHHHHHDAHHHHHHHHD 263
Query: 593 QLHHHSLHHHFEEH 634
HHH HHH + H
Sbjct: 264 AHHHH--HHHHDAH 275
Score = 37.4 bits (85), Expect = 0.17
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 536 HQRHHQHPQFEYHCHHHYLQLHHHSLHHHFEEH 634
H+ HH H E+H HH HHH HH H
Sbjct: 58 HEEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHH 90
>pir||A54523 histidine-rich protein - Plasmodium lophurae (fragment)
gi|552196|gb|AAA29616.1| histidine-rich protein
[Plasmodium lophurae]
Length = 140
Score = 47.4 bits (111), Expect = 2e-04
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQ-----HPQFEYHC 577
H H+ PH+ HH + +F + P H HH H + H
Sbjct: 36 HAPHHHHHHHHAPHHHHHHPWFHHHHHHPWFHHHHHHPWFHHHHHHDAHHHHHHHHDAHH 95
Query: 578 HHHYLQLHHHSLHHHFEEH 634
HHH+ HHH HHH H
Sbjct: 96 HHHHHDAHHHHHHHHDAHH 114
Score = 46.6 bits (109), Expect = 3e-04
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = +2
Query: 416 FGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQ 595
F H+ DA H+ + H HH H HH H +H HHH+
Sbjct: 75 FHHHHHHDAHHHHHHHHDAHHHHHHHDA------------HHHHHHHHDAHHHHHHHHDA 122
Query: 596 LHHHSLHHHFEEH 634
HHH HHH + H
Sbjct: 123 HHHH--HHHHDAH 133
Score = 43.5 bits (101), Expect = 0.002
Identities = 20/61 (32%), Positives = 24/61 (38%)
Frame = +2
Query: 452 HNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHHHSLHHHFEE 631
H+ H HH + PH HH H +H HHH+ HHH HHH
Sbjct: 2 HHHHHAPHHHHHHHHA-----------PHHHHHHHHAPHHHHHHHHAPHHHH--HHHHAP 48
Query: 632 H 634
H
Sbjct: 49 H 49
Score = 43.5 bits (101), Expect = 0.002
Identities = 25/76 (32%), Positives = 31/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+ PH+ HH + +F + P H HH HP F +H HHH
Sbjct: 26 HAPHHHHHHHHAPHHHHHHHHAPHHHHHHPWFHHHHHHPWFHHHHH-HPWFHHH-HHHDA 83
Query: 593 QLHHHSLH--HHFEEH 634
HHH H HH H
Sbjct: 84 HHHHHHHHDAHHHHHH 99
Score = 43.1 bits (100), Expect = 0.003
Identities = 21/74 (28%), Positives = 27/74 (36%)
Frame = +2
Query: 413 HFGQHYPLDAQIPHNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL 592
H H+P H+ + H HH + HH H +H HHH+
Sbjct: 67 HHHHHHPW---FHHHHHHDAHHHHHHHH-------------DAHHHHHHHDAHHHHHHHH 110
Query: 593 QLHHHSLHHHFEEH 634
HHH HHH H
Sbjct: 111 DAHHHHHHHHDAHH 124
Score = 40.8 bits (94), Expect = 0.015
Identities = 14/30 (46%), Positives = 16/30 (52%)
Frame = +2
Query: 545 HHQHPQFEYHCHHHYLQLHHHSLHHHFEEH 634
HH H +H HHH+ HHH HHH H
Sbjct: 1 HHHHHHAPHHHHHHHHAPHHHHHHHHAPHH 30
Score = 40.4 bits (93), Expect = 0.020
Identities = 19/63 (30%), Positives = 24/63 (37%), Gaps = 2/63 (3%)
Frame = +2
Query: 452 HNLQMETQHSCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYL--QLHHHSLHHHF 625
H+ H HH + + PH HH H +H HHH+ HHH HH
Sbjct: 1 HHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHPWFHHH 60
Query: 626 EEH 634
H
Sbjct: 61 HHH 63
>ref|NP_732342.2| CG31122-PA [Drosophila melanogaster] gi|28381352|gb|AAF55560.3|
CG31122-PA [Drosophila melanogaster]
Length = 642
Score = 47.0 bits (110), Expect = 2e-04
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 533 PHQRHHQHPQFEYHCHHHYLQLHHHSLHHHFEEHLC 640
P RHH HP + HHH HHHS HHH H C
Sbjct: 593 PQARHHHHPATSHRHHHHQHHSHHHS-HHHHHHHQC 627
Score = 32.3 bits (72), Expect = 5.5
Identities = 17/55 (30%), Positives = 23/55 (40%), Gaps = 3/55 (5%)
Frame = +2
Query: 452 HNLQMETQH---SCHHFYVFFFFY*LDPPLPHQRHHQHPQFEYHCHHHYLQLHHH 607
H Q +TQ + HH + P H+ HH +H HHH+ HHH
Sbjct: 583 HMQQQQTQQPPQARHHHH---------PATSHRHHHHQHHSHHHSHHHH---HHH 625
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 572,963,765
Number of Sequences: 1393205
Number of extensions: 13290025
Number of successful extensions: 123661
Number of sequences better than 10.0: 1786
Number of HSP's better than 10.0 without gapping: 57182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95011
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
