Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007621A_C01 KMC007621A_c01
(492 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194945.2| putative protein; protein id: At4g32180.1, supp... 80 2e-14
pir||T05410 hypothetical protein F10M6.180 - Arabidopsis thalian... 80 2e-14
pir||T02294 hypothetical protein T13D8.31 - Arabidopsis thaliana... 62 3e-09
ref|NP_176247.1| pantothenate kinase, putative; protein id: At1g... 62 3e-09
ref|NP_010820.1| Pantothenate kinase (ATP:D-pantothenate 4'-phos... 50 2e-05
>ref|NP_194945.2| putative protein; protein id: At4g32180.1, supported by cDNA:
gi_20466745 [Arabidopsis thaliana]
gi|20466746|gb|AAM20690.1| putative protein [Arabidopsis
thaliana]
Length = 870
Score = 79.7 bits (195), Expect = 2e-14
Identities = 39/69 (56%), Positives = 49/69 (70%)
Frame = -3
Query: 490 FWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVD 311
FWSKGE QAMFLRHEGFLGA+GAFM +KHGL +L+ +Q+ ++ P + IHGP
Sbjct: 367 FWSKGEMQAMFLRHEGFLGALGAFMSYEKHGLDDLMSHQLVERFPMGAPYTGGNIHGPPL 426
Query: 310 GELNGDESI 284
G+L DE I
Sbjct: 427 GDL--DEKI 433
>pir||T05410 hypothetical protein F10M6.180 - Arabidopsis thaliana
gi|2864625|emb|CAA16972.1| putative protein [Arabidopsis
thaliana] gi|7270122|emb|CAB79936.1| putative protein
[Arabidopsis thaliana]
Length = 838
Score = 79.7 bits (195), Expect = 2e-14
Identities = 39/69 (56%), Positives = 49/69 (70%)
Frame = -3
Query: 490 FWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVD 311
FWSKGE QAMFLRHEGFLGA+GAFM +KHGL +L+ +Q+ ++ P + IHGP
Sbjct: 398 FWSKGEMQAMFLRHEGFLGALGAFMSYEKHGLDDLMSHQLVERFPMGAPYTGGNIHGPPL 457
Query: 310 GELNGDESI 284
G+L DE I
Sbjct: 458 GDL--DEKI 464
>pir||T02294 hypothetical protein T13D8.31 - Arabidopsis thaliana
gi|3249085|gb|AAC24069.1| T13D8.31 [Arabidopsis
thaliana]
Length = 404
Score = 62.4 bits (150), Expect = 3e-09
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = -3
Query: 490 FWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVD 311
FWS+GEA+AMFLRHEGFLGA+GAF + +L + Q + H PV
Sbjct: 329 FWSRGEAKAMFLRHEGFLGALGAFTSYNDQSHNDLKPHHHTVQRAILNCSGHNFRHIPVT 388
Query: 310 GELNGDESIECSV 272
LN E+IECS+
Sbjct: 389 SNLNESETIECSI 401
>ref|NP_176247.1| pantothenate kinase, putative; protein id: At1g60440.1 [Arabidopsis
thaliana]
Length = 380
Score = 62.4 bits (150), Expect = 3e-09
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = -3
Query: 490 FWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVD 311
FWS+GEA+AMFLRHEGFLGA+GAF + +L + Q + H PV
Sbjct: 305 FWSRGEAKAMFLRHEGFLGALGAFTSYNDQSHNDLKPHHHTVQRAILNCSGHNFRHIPVT 364
Query: 310 GELNGDESIECSV 272
LN E+IECS+
Sbjct: 365 SNLNESETIECSI 377
>ref|NP_010820.1| Pantothenate kinase (ATP:D-pantothenate 4'-phosphotransferase, EC
2.7.1.33) catalyzes the first committed step in the
universal biosynthetic pathway leading to CoA.; Ydr531wp
[Saccharomyces cerevisiae] gi|2131549|pir||S69586
hypothetical protein YDR531w - yeast (Saccharomyces
cerevisiae) gi|927798|gb|AAB64970.1| Ydr531wp; CAI: 0.14
[Saccharomyces cerevisiae]
Length = 367
Score = 49.7 bits (117), Expect = 2e-05
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -3
Query: 490 FWSKGEAQAMFLRHEGFLGAMGAFMRSDKH 401
FWS+G QA FL+HEG+LGAMGAF+ + +H
Sbjct: 330 FWSQGSKQAFFLKHEGYLGAMGAFLSASRH 359
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 396,141,692
Number of Sequences: 1393205
Number of extensions: 7924627
Number of successful extensions: 20449
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 17713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20439
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
