Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007591A_C01 KMC007591A_c01
(554 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04708|PROC_PEA Pyrroline-5-carboxylate reductase (P5CR) (P5C... 148 4e-35
dbj|BAB33038.1| VuP5CR [Vigna unguiculata] 145 2e-34
sp|P17817|PROC_SOYBN Pyrroline-5-carboxylate reductase (P5CR) (P... 145 2e-34
ref|NP_196984.1| pyrroline-5-carboxylate reductase; protein id: ... 144 6e-34
gb|AAO32084.1| pyrroline-5-carboxylate reductase [Hordeum vulgar... 132 2e-30
>sp|Q04708|PROC_PEA Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
gi|7431797|pir||T06477 probable pyrroline-5-carboxylate
reductase (EC 1.5.1.2) - garden pea
gi|20851|emb|CAA44646.1| pyrroline carboxylate reductase
[Pisum sativum] gi|445614|prf||1909360A pyrroline
carboxylate reductase
Length = 273
Score = 148 bits (374), Expect = 4e-35
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = -2
Query: 553 DGGVAAGLPRDLALSLASQTVLGAASMVTPTGKHPGQLKDDVTSPGGTTIAGVHELEKGG 374
DGGVAAGLPRDLALSLASQTVLGAASM T +GKHPGQLKDDVTSPGGTTIAGVHELEKGG
Sbjct: 194 DGGVAAGLPRDLALSLASQTVLGAASMATLSGKHPGQLKDDVTSPGGTTIAGVHELEKGG 253
Query: 373 FRATLMNAVVAAAKRSRELS 314
FR TLMNAVVAAAKRSRELS
Sbjct: 254 FRGTLMNAVVAAAKRSRELS 273
>dbj|BAB33038.1| VuP5CR [Vigna unguiculata]
Length = 274
Score = 145 bits (367), Expect = 2e-34
Identities = 73/80 (91%), Positives = 76/80 (94%)
Frame = -2
Query: 553 DGGVAAGLPRDLALSLASQTVLGAASMVTPTGKHPGQLKDDVTSPGGTTIAGVHELEKGG 374
DGGVAAGLPRDL+LSLASQTVLGAASMVT +GKHPGQLKDDVTSPGGTTI G+HELE GG
Sbjct: 195 DGGVAAGLPRDLSLSLASQTVLGAASMVTQSGKHPGQLKDDVTSPGGTTITGIHELENGG 254
Query: 373 FRATLMNAVVAAAKRSRELS 314
FR TLMNAVVAAAKRSRELS
Sbjct: 255 FRGTLMNAVVAAAKRSRELS 274
>sp|P17817|PROC_SOYBN Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
gi|99952|pir||S10186 pyrroline-5-carboxylate reductase
(EC 1.5.1.2) - soybean gi|18724|emb|CAA34401.1|
pyrroline-5-carboxylate reductase (AA 1- 274) [Glycine
max]
Length = 274
Score = 145 bits (367), Expect = 2e-34
Identities = 73/80 (91%), Positives = 76/80 (94%)
Frame = -2
Query: 553 DGGVAAGLPRDLALSLASQTVLGAASMVTPTGKHPGQLKDDVTSPGGTTIAGVHELEKGG 374
DGGVAAGLPRDL+LSLASQTVLGAASMV+ TGKHPGQLKDDVTSPGGTTI G+HELE GG
Sbjct: 195 DGGVAAGLPRDLSLSLASQTVLGAASMVSQTGKHPGQLKDDVTSPGGTTITGIHELENGG 254
Query: 373 FRATLMNAVVAAAKRSRELS 314
FR TLMNAVVAAAKRSRELS
Sbjct: 255 FRGTLMNAVVAAAKRSRELS 274
>ref|NP_196984.1| pyrroline-5-carboxylate reductase; protein id: At5g14800.1,
supported by cDNA: 36386., supported by cDNA:
gi_15294223, supported by cDNA: gi_20453290 [Arabidopsis
thaliana] gi|1709786|sp|P54904|PROC_ARATH
Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
gi|541894|pir||JQ2334 pyrroline-5-carboxylate reductase
(EC 1.5.1.2) [similarity] - Arabidopsis thaliana
gi|166815|gb|AAA61346.1| pyrroline carboxylate reductase
gi|1632776|emb|CAA70148.1| T5r protein [Arabidopsis
thaliana] gi|9755748|emb|CAC01879.1|
pyrroline-5-carboxylate reductase [Arabidopsis thaliana]
gi|15294224|gb|AAK95289.1|AF410303_1 AT5g14800/T9L3_100
[Arabidopsis thaliana] gi|20453291|gb|AAM19884.1|
AT5g14800/T9L3_100 [Arabidopsis thaliana]
gi|21593123|gb|AAM65072.1| pyrroline-5-carboxylate
reductase [Arabidopsis thaliana]
Length = 276
Score = 144 bits (364), Expect = 6e-34
Identities = 74/80 (92%), Positives = 77/80 (95%)
Frame = -2
Query: 553 DGGVAAGLPRDLALSLASQTVLGAASMVTPTGKHPGQLKDDVTSPGGTTIAGVHELEKGG 374
DGGVAAGLPR+LALSLASQTVLGAA+MV+ TGKHPG LKDDVTSPGGTTIAGVHELEKG
Sbjct: 195 DGGVAAGLPRELALSLASQTVLGAATMVSKTGKHPGVLKDDVTSPGGTTIAGVHELEKGS 254
Query: 373 FRATLMNAVVAAAKRSRELS 314
FRATLMNAVVAAAKRSRELS
Sbjct: 255 FRATLMNAVVAAAKRSRELS 274
>gb|AAO32084.1| pyrroline-5-carboxylate reductase [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 132 bits (333), Expect = 2e-30
Identities = 67/80 (83%), Positives = 71/80 (88%)
Frame = -2
Query: 553 DGGVAAGLPRDLALSLASQTVLGAASMVTPTGKHPGQLKDDVTSPGGTTIAGVHELEKGG 374
DGGVAAGLPRDLAL LA+QTVLGAA+MV+ TGKHPGQLKD VTSP GTTIAGVHELEKG
Sbjct: 194 DGGVAAGLPRDLALGLAAQTVLGAATMVSETGKHPGQLKDQVTSPAGTTIAGVHELEKGS 253
Query: 373 FRATLMNAVVAAAKRSRELS 314
FR TL+NAVVAA R RELS
Sbjct: 254 FRGTLINAVVAATTRCRELS 273
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,020,931
Number of Sequences: 1393205
Number of extensions: 9939323
Number of successful extensions: 21885
Number of sequences better than 10.0: 200
Number of HSP's better than 10.0 without gapping: 20427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21450
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
