Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007480A_C01 KMC007480A_c01
(514 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD35089.1|AF148877_1 putative aldehyde dehydrogenase OS-ALDH... 123 1e-27
ref|NP_195348.1| aldehyde dehydrogenase like protein; protein id... 115 2e-25
gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis tha... 94 9e-19
ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: A... 94 9e-19
pir||T04770 aldehyde dehydrogenase (NAD+) homolog F10M10.10 - Ar... 92 4e-18
>gb|AAD35089.1|AF148877_1 putative aldehyde dehydrogenase OS-ALDH [Oryza sativa subsp.
indica]
Length = 486
Score = 123 bits (309), Expect = 1e-27
Identities = 51/95 (53%), Positives = 74/95 (77%)
Frame = -3
Query: 512 QNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSY 333
+ R+++ETSSGS++FND+++QY D++PFGG+GESGFG YHGK++F+ FSH K +VRRS
Sbjct: 383 KQRIVAETSSGSVLFNDAIVQYGLDSVPFGGIGESGFGQYHGKYTFELFSHRKAVVRRSL 442
Query: 332 LTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLL 228
L +F +RYPPW K +L + +DY+ L+L LL
Sbjct: 443 LVEFMFRYPPWDEYKMGMLRRVFRFDYVSLVLALL 477
>ref|NP_195348.1| aldehyde dehydrogenase like protein; protein id: At4g36250.1
[Arabidopsis thaliana] gi|7431493|pir||T04594 aldehyde
dehydrogenase homolog F23E13.140 - Arabidopsis thaliana
gi|2961384|emb|CAA18131.1| aldehyde dehydrogenase like
protein [Arabidopsis thaliana]
gi|7270578|emb|CAB80296.1| aldehyde dehydrogenase like
protein [Arabidopsis thaliana]
Length = 433
Score = 115 bits (289), Expect = 2e-25
Identities = 54/99 (54%), Positives = 68/99 (68%)
Frame = -3
Query: 512 QNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSY 333
+ R++SETSSGS+ FND M+QY D LPFGGVGESG G YHGK+SFD FSH K I+ S
Sbjct: 335 KTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHGKYSFDCFSHEKAIMEGSL 394
Query: 332 LTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKR 216
D RYPPW K + +++ Y L+L++LGLKR
Sbjct: 395 GMDLEARYPPWNNFKLTFIRLAFREAYFKLILLMLGLKR 433
>gb|AAM61211.1| aldehyde dehydrogenase, putative [Arabidopsis thaliana]
Length = 484
Score = 94.0 bits (232), Expect = 9e-19
Identities = 46/97 (47%), Positives = 60/97 (61%)
Frame = -3
Query: 512 QNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSY 333
+ R + S+G ++ ND + A TLPFGGVGESG G YHGKFSFD FSH K ++ RS
Sbjct: 387 KERFTATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL 446
Query: 332 LTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGL 222
D RYPP++ K +LL+ + + L VLLGL
Sbjct: 447 FGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLGL 483
>ref|NP_175081.1| aldehyde dehydrogenase, putative; protein id: At1g44170.1,
supported by cDNA: 1141., supported by cDNA: gi_18175878
[Arabidopsis thaliana] gi|25284174|pir||H96505 probable
aldehyde dehydrogenase [imported] - Arabidopsis thaliana
gi|12320819|gb|AAG50550.1|AC074228_5 aldehyde
dehydrogenase, putative [Arabidopsis thaliana]
gi|18175879|gb|AAL59944.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 484
Score = 94.0 bits (232), Expect = 9e-19
Identities = 46/97 (47%), Positives = 60/97 (61%)
Frame = -3
Query: 512 QNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSY 333
+ R + S+G ++ ND + A TLPFGGVGESG G YHGKFSFD FSH K ++ RS
Sbjct: 387 KERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSL 446
Query: 332 LTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGL 222
D RYPP++ K +LL+ + + L VLLGL
Sbjct: 447 FGDSAVRYPPYSRGKLRLLKALVDSNIFDLFKVLLGL 483
>pir||T04770 aldehyde dehydrogenase (NAD+) homolog F10M10.10 - Arabidopsis
thaliana gi|4455169|emb|CAB36701.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|7270374|emb|CAB80141.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 533
Score = 92.0 bits (227), Expect = 4e-18
Identities = 41/101 (40%), Positives = 61/101 (59%)
Frame = -3
Query: 512 QNRMISETSSGSLMFNDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSY 333
+ + + + S+G + ND++L LPFGGVGESG G YHGKFS++TFSH KG++ RS+
Sbjct: 433 EKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYETFSHKKGVLYRSF 492
Query: 332 LTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKRPS 210
D RYPP+T K +L+ + + +L G + S
Sbjct: 493 SGDADLRYPPYTPKKKMVLKALLSSNIFAAILAFFGFSKDS 533
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,112,392
Number of Sequences: 1393205
Number of extensions: 9160651
Number of successful extensions: 22703
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 22072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22694
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
