Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007317A_C01 KMC007317A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase... 126 1e-28
ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10); pr... 125 2e-28
sp|O82703|VAG2_TOBAC Vacuolar ATP synthase subunit G 2 (V-ATPase... 124 9e-28
sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G... 120 8e-27
emb|CAD27444.1| vacuolar ATPase subunit G [Mesembryanthemum crys... 112 4e-24
>sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1) (Vacuolar
proton pump G subunit 1) gi|3717987|emb|CAA06756.1| G
subunit of Vacuolar-type H+-ATPase [Nicotiana tabacum]
Length = 110
Score = 126 bits (317), Expect = 1e-28
Identities = 64/88 (72%), Positives = 76/88 (85%)
Frame = -3
Query: 526 IVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAK 347
IVN A+ K ARLKQAKEEA+KEIAE+RA +E EFQ+K+ +SGDSGANVKRLEQET AK
Sbjct: 23 IVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAK 82
Query: 346 IQHLQTEAARISDDVVAMLLKYVTTVKN 263
I+HL+TEA R+S DVV MLL++VTTVKN
Sbjct: 83 IEHLKTEAERVSPDVVQMLLRHVTTVKN 110
>ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10); protein id:
At3g01390.1, supported by cDNA: gi_18252860, supported
by cDNA: gi_5853314 [Arabidopsis thaliana]
gi|12585427|sp|O82628|VAG1_ARATH Vacuolar ATP synthase
subunit G 1 (V-ATPase G subunit 1) (Vacuolar proton pump
G subunit 1) gi|11279178|pir||T51825 H+-exporting ATPase
(EC 3.6.3.6) chain G, vacuolar [imported] - Arabidopsis
thaliana gi|3717946|emb|CAA06758.1| vag1 [Arabidopsis
thaliana] gi|5853315|gb|AAD54418.1| vacuolar membrane
ATPase subunit G [Arabidopsis thaliana]
gi|6692259|gb|AAF24609.1|AC010870_2 vacuolar membrane
ATPase subunit G (AVMA10) [Arabidopsis thaliana]
gi|18252861|gb|AAL62357.1| vacuolar membrane ATPase
subunit G (AVMA10) [Arabidopsis thaliana]
gi|21389701|gb|AAM48049.1| vacuolar membrane ATPase
subunit G AVMA10 [Arabidopsis thaliana]
Length = 110
Score = 125 bits (315), Expect = 2e-28
Identities = 63/88 (71%), Positives = 77/88 (86%)
Frame = -3
Query: 526 IVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAK 347
IVNAA+ K+ARLKQAKEEA+KEIAEY+A+ E +FQ+K+ ++SGDSGANVKRLEQET K
Sbjct: 23 IVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTK 82
Query: 346 IQHLQTEAARISDDVVAMLLKYVTTVKN 263
I+ L+ EA+RIS DVV MLLK+VTTVKN
Sbjct: 83 IEQLKNEASRISKDVVEMLLKHVTTVKN 110
>sp|O82703|VAG2_TOBAC Vacuolar ATP synthase subunit G 2 (V-ATPase G subunit 2) (Vacuolar
proton pump G subunit 2) gi|3717989|emb|CAA06757.1| vag2
[Nicotiana tabacum]
Length = 111
Score = 124 bits (310), Expect = 9e-28
Identities = 65/88 (73%), Positives = 74/88 (83%)
Frame = -3
Query: 526 IVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAK 347
IVNAA+ K AR+KQAKEEA+KEIAE+RA +E EFQ+ V +SGDSGANVKRLEQET AK
Sbjct: 24 IVNAARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAK 83
Query: 346 IQHLQTEAARISDDVVAMLLKYVTTVKN 263
IQHL+TEA IS DVV MLL+ VTTVKN
Sbjct: 84 IQHLKTEAESISHDVVQMLLRQVTTVKN 111
>sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G subunit) (Vacuolar
proton pump G subunit) gi|5917785|gb|AAD56039.1|
vacuolar membrane ATPase subunit G [Citrus limon]
Length = 110
Score = 120 bits (302), Expect = 8e-27
Identities = 61/88 (69%), Positives = 75/88 (84%)
Frame = -3
Query: 526 IVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAK 347
IV AA+N K+ARLKQAKEEA++EIAEYRA++E EFQ+K+++S GDSGANVKRLEQET+ K
Sbjct: 23 IVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVK 82
Query: 346 IQHLQTEAARISDDVVAMLLKYVTTVKN 263
I HL+ A +I DVV M LK+VTTVKN
Sbjct: 83 IHHLKAGAEKIQYDVVQMFLKHVTTVKN 110
>emb|CAD27444.1| vacuolar ATPase subunit G [Mesembryanthemum crystallinum]
Length = 109
Score = 112 bits (279), Expect = 4e-24
Identities = 55/85 (64%), Positives = 74/85 (86%)
Frame = -3
Query: 526 IVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAK 347
I+NAAKN K ARL+QAKEEA+KEIAE+RA++E + Q+++++S+GDSGANVKRLEQET AK
Sbjct: 23 IINAAKNAKTARLRQAKEEAEKEIAEFRAQMEADHQRRLAESTGDSGANVKRLEQETNAK 82
Query: 346 IQHLQTEAARISDDVVAMLLKYVTT 272
I+ L+ +A+ IS VV MLL+YVT+
Sbjct: 83 IEQLKIQASTISPYVVEMLLRYVTS 107
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 384,745,760
Number of Sequences: 1393205
Number of extensions: 7337227
Number of successful extensions: 20641
Number of sequences better than 10.0: 174
Number of HSP's better than 10.0 without gapping: 19650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20561
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
