Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007254A_C01 KMC007254A_c01
(533 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB11979.1| MGDG synthase type A [Glycine max] 145 2e-44
pir||T10478 probable 1,2-diacylglycerol 3-beta-galactosyltransfe... 145 7e-42
ref|NP_194906.1| monogalactosyldiacylglycerol synthase - like pr... 146 2e-40
emb|CAB56218.1| MGDG synthase A [Spinacia oleracea] 135 4e-39
dbj|BAB11980.1| MGDG synthase type A [Nicotiana tabacum] 142 4e-38
>dbj|BAB11979.1| MGDG synthase type A [Glycine max]
Length = 530
Score = 145 bits (367), Expect(3) = 2e-44
Identities = 68/71 (95%), Positives = 70/71 (97%)
Frame = -2
Query: 532 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 353
TKMEECMGACDCIITKAGPGTIAEA IRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS
Sbjct: 412 TKMEECMGACDCIITKAGPGTIAEAQIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 471
Query: 352 PKEIAKIVADW 320
PK+IAKIVA+W
Sbjct: 472 PKDIAKIVAEW 482
Score = 45.1 bits (105), Expect(3) = 2e-44
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = -3
Query: 246 VVKIVHDLDELVRPRSYLPEYSCIA 172
V KIVHDL ELVR RSYLPEYSC A
Sbjct: 506 VFKIVHDLHELVRQRSYLPEYSCTA 530
Score = 30.8 bits (68), Expect(3) = 2e-44
Identities = 14/19 (73%), Positives = 16/19 (83%)
Frame = -1
Query: 311 PKAHELTVMSPNALKLARP 255
PKA+EL MS NAL+LARP
Sbjct: 485 PKAYELQQMSQNALRLARP 503
>pir||T10478 probable 1,2-diacylglycerol 3-beta-galactosyltransferase (EC
2.4.1.46) precursor, chloroplast - cucumber
gi|1805254|gb|AAC49624.1| monogalactosyldiacylglycerol
synthase [Cucumis sativus]
Length = 525
Score = 145 bits (367), Expect(3) = 7e-42
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -2
Query: 532 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 353
TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS
Sbjct: 409 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 468
Query: 352 PKEIAKIVADW 320
PKEIA IVA W
Sbjct: 469 PKEIANIVAKW 479
Score = 35.4 bits (80), Expect(3) = 7e-42
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3
Query: 246 VVKIVHDLDELVRPRSYLPEYS 181
V KIVHDL ELV+ RS++P+YS
Sbjct: 503 VFKIVHDLHELVKQRSFVPQYS 524
Score = 31.6 bits (70), Expect(3) = 7e-42
Identities = 14/19 (73%), Positives = 16/19 (83%)
Frame = -1
Query: 311 PKAHELTVMSPNALKLARP 255
PKA EL +MS NAL+LARP
Sbjct: 482 PKADELLIMSQNALRLARP 500
>ref|NP_194906.1| monogalactosyldiacylglycerol synthase - like protein; protein id:
At4g31780.1, supported by cDNA: gi_20260131, supported
by cDNA: gi_7621496, supported by cDNA: gi_9927296
[Arabidopsis thaliana] gi|7488035|pir||T05092 probable
1,2-diacylglycerol 3-beta-galactosyltransferase (EC
2.4.1.46) - Arabidopsis thaliana
gi|3281850|emb|CAA19745.1| monogalactosyldiacylglycerol
synthase - like protein [Arabidopsis thaliana]
gi|7270081|emb|CAB79896.1| monogalactosyldiacylglycerol
synthase-like protein [Arabidopsis thaliana]
gi|7621497|gb|AAF65066.1| monogalactosyldiacylglycerol
synthase [Arabidopsis thaliana]
gi|9927297|dbj|BAB12042.1| MGDG synthase type A
[Arabidopsis thaliana] gi|20260132|gb|AAM12964.1| strong
similarity to monogalactosyldiacylglycerol synthase,
Cucumis sativus, PID:g1805254 [Arabidopsis thaliana]
Length = 533
Score = 146 bits (369), Expect(3) = 2e-40
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = -2
Query: 532 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 353
TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILN YIAGQEAGNVPYVVENGCGKFSKS
Sbjct: 415 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKS 474
Query: 352 PKEIAKIVADW 320
PKEI+KIVADW
Sbjct: 475 PKEISKIVADW 485
Score = 34.3 bits (77), Expect(3) = 2e-40
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 246 VVKIVHDLDELVRPRSYLPEYSCIA 172
V KIVHD+ ELVR ++ LP+ SC A
Sbjct: 509 VFKIVHDMHELVRKKNSLPQLSCTA 533
Score = 26.9 bits (58), Expect(3) = 2e-40
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 311 PKAHELTVMSPNALKLARP 255
P + EL +MS NAL+LA+P
Sbjct: 488 PASKELEIMSQNALRLAKP 506
>emb|CAB56218.1| MGDG synthase A [Spinacia oleracea]
Length = 522
Score = 135 bits (341), Expect(3) = 4e-39
Identities = 63/71 (88%), Positives = 67/71 (93%)
Frame = -2
Query: 532 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 353
TK+EECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYV+ENG GK+ KS
Sbjct: 404 TKIEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVIENGIGKYLKS 463
Query: 352 PKEIAKIVADW 320
PKEIAK V+ W
Sbjct: 464 PKEIAKTVSQW 474
Score = 37.0 bits (84), Expect(3) = 4e-39
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -3
Query: 246 VVKIVHDLDELVRPRSYLPEYSCIA 172
V KIVHDLDELVR + ++ +YSC A
Sbjct: 498 VFKIVHDLDELVRQKIFVRQYSCAA 522
Score = 30.8 bits (68), Expect(3) = 4e-39
Identities = 14/19 (73%), Positives = 16/19 (83%)
Frame = -1
Query: 311 PKAHELTVMSPNALKLARP 255
PKA+EL +MS NALK ARP
Sbjct: 477 PKANELQIMSQNALKHARP 495
>dbj|BAB11980.1| MGDG synthase type A [Nicotiana tabacum]
Length = 535
Score = 142 bits (359), Expect(3) = 4e-38
Identities = 66/71 (92%), Positives = 69/71 (96%)
Frame = -2
Query: 532 TKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKFSKS 353
TKMEECMGACDCIITKAGPGTIAEA+IRGLPIILNDYIAGQEAGNVPYV+ENGCGKFSKS
Sbjct: 418 TKMEECMGACDCIITKAGPGTIAEAVIRGLPIILNDYIAGQEAGNVPYVIENGCGKFSKS 477
Query: 352 PKEIAKIVADW 320
PK+IA IVA W
Sbjct: 478 PKKIANIVAQW 488
Score = 28.9 bits (63), Expect(3) = 4e-38
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 246 VVKIVHDLDELVRPRSYLPE 187
V KIVHD+ ELVR R++ P+
Sbjct: 512 VFKIVHDMHELVRQRNFEPQ 531
Score = 28.5 bits (62), Expect(3) = 4e-38
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 311 PKAHELTVMSPNALKLARP 255
P+ EL +MS NAL+LARP
Sbjct: 491 PRQDELRIMSQNALRLARP 509
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,983,301
Number of Sequences: 1393205
Number of extensions: 10392860
Number of successful extensions: 29566
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 28999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29560
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
