Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007120A_C01 KMC007120A_c01
(512 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175866.1| hypothetical protein; protein id: At1g54650.1 [... 166 1e-40
gb|AAO42060.1| unknown protein [Arabidopsis thaliana] 166 1e-40
pir||F96588 hypothetical protein T22H22.9 [imported] - Arabidops... 166 1e-40
gb|AAH45969.1| Similar to RIKEN cDNA 1600013P15 gene [Danio rerio] 97 1e-19
gb|AAM08757.1| similar to Homo sapiens (Human). HSPC266 (Fragmen... 96 3e-19
>ref|NP_175866.1| hypothetical protein; protein id: At1g54650.1 [Arabidopsis
thaliana]
Length = 314
Score = 166 bits (421), Expect = 1e-40
Identities = 75/95 (78%), Positives = 84/95 (87%)
Frame = -3
Query: 510 CFTVLKPGGMVLLRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLNA 331
CF VLKPGG++L RDYGLYDMTMLRFEP+KRVGFREY+RSDGT SYFF L+ R LF +A
Sbjct: 217 CFAVLKPGGLLLFRDYGLYDMTMLRFEPEKRVGFREYVRSDGTLSYFFCLDTARKLFTDA 276
Query: 330 GFTELELDYCCVKSVNRRKGKSMRRVWVHGKFQKP 226
GF E+EL+YCCVK+VNRRKGK M RVWVHGKFQKP
Sbjct: 277 GFIEVELEYCCVKAVNRRKGKDMYRVWVHGKFQKP 311
>gb|AAO42060.1| unknown protein [Arabidopsis thaliana]
Length = 299
Score = 166 bits (421), Expect = 1e-40
Identities = 75/95 (78%), Positives = 84/95 (87%)
Frame = -3
Query: 510 CFTVLKPGGMVLLRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLNA 331
CF VLKPGG++L RDYGLYDMTMLRFEP+KRVGFREY+RSDGT SYFF L+ R LF +A
Sbjct: 202 CFAVLKPGGLLLFRDYGLYDMTMLRFEPEKRVGFREYVRSDGTLSYFFCLDTARKLFTDA 261
Query: 330 GFTELELDYCCVKSVNRRKGKSMRRVWVHGKFQKP 226
GF E+EL+YCCVK+VNRRKGK M RVWVHGKFQKP
Sbjct: 262 GFIEVELEYCCVKAVNRRKGKDMYRVWVHGKFQKP 296
>pir||F96588 hypothetical protein T22H22.9 [imported] - Arabidopsis thaliana
gi|3776564|gb|AAC64881.1| Similar to hypothetical
protein T1D16.16 gi|3075397 from A. thaliana BAC
gb|AC004484. [Arabidopsis thaliana]
Length = 325
Score = 166 bits (421), Expect = 1e-40
Identities = 75/95 (78%), Positives = 84/95 (87%)
Frame = -3
Query: 510 CFTVLKPGGMVLLRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLNA 331
CF VLKPGG++L RDYGLYDMTMLRFEP+KRVGFREY+RSDGT SYFF L+ R LF +A
Sbjct: 228 CFAVLKPGGLLLFRDYGLYDMTMLRFEPEKRVGFREYVRSDGTLSYFFCLDTARKLFTDA 287
Query: 330 GFTELELDYCCVKSVNRRKGKSMRRVWVHGKFQKP 226
GF E+EL+YCCVK+VNRRKGK M RVWVHGKFQKP
Sbjct: 288 GFIEVELEYCCVKAVNRRKGKDMYRVWVHGKFQKP 322
>gb|AAH45969.1| Similar to RIKEN cDNA 1600013P15 gene [Danio rerio]
Length = 286
Score = 97.1 bits (240), Expect = 1e-19
Identities = 45/94 (47%), Positives = 66/94 (69%)
Frame = -3
Query: 507 FTVLKPGGMVLLRDYGLYDMTMLRFEPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLNAG 328
+ VL+PGG+VL RDYGLYD MLRF+ ++G Y+R DGTRS+FF+ E + LF NAG
Sbjct: 190 YKVLRPGGIVLFRDYGLYDHAMLRFKSGNKLGENFYVRQDGTRSFFFSREYLAGLFQNAG 249
Query: 327 FTELELDYCCVKSVNRRKGKSMRRVWVHGKFQKP 226
F L +Y ++VN+++G + RV++ KF++P
Sbjct: 250 FETLVNEYVLRETVNKKEGLCVPRVFLQSKFRRP 283
>gb|AAM08757.1| similar to Homo sapiens (Human). HSPC266 (Fragment) [Dictyostelium
discoideum]
Length = 437
Score = 95.5 bits (236), Expect = 3e-19
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Frame = -3
Query: 507 FTVLKPGGMVLLRDYGLYDMTMLRF--EPDKRVGFREYMRSDGTRSYFFTLEIVRNLFLN 334
F LKPGG++ +RDYGLYDMT LRF + K++ Y+R+DGTR+YFFT +++ +F
Sbjct: 295 FKSLKPGGVLYIRDYGLYDMTQLRFISKKGKKIDENFYLRADGTRTYFFTTQVLSEIFEA 354
Query: 333 AGFTELELDYCCVKSVNRRKGKSMRRVWVHGKFQKP 226
AGF L Y + NR++ SM RVWV GKF KP
Sbjct: 355 AGFKTLVSKYDTRELRNRKRMISMYRVWVRGKFMKP 390
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,995,898
Number of Sequences: 1393205
Number of extensions: 9491048
Number of successful extensions: 21209
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 20773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21181
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
