Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007048A_C01 KMC007048A_c01
(750 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T48109 hypothetical protein F16M2.50 - Arabidopsis thaliana... 274 1e-72
ref|NP_567142.1| putative protein; protein id: At3g63200.1, supp... 274 1e-72
ref|NP_181455.1| patatin family; protein id: At2g39220.1, suppor... 145 5e-34
gb|AAN41269.1| unknown protein [Arabidopsis thaliana] 135 8e-31
ref|NP_191055.1| patatin-related; protein id: At3g54950.1 [Arabi... 134 2e-30
>pir||T48109 hypothetical protein F16M2.50 - Arabidopsis thaliana
gi|7523402|emb|CAB86421.1| putative protein [Arabidopsis
thaliana]
Length = 382
Score = 274 bits (700), Expect = 1e-72
Identities = 144/199 (72%), Positives = 163/199 (81%)
Frame = -2
Query: 737 WKVCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAVNG 558
WKVCRATSATPS F PF++ SVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFP+VNG
Sbjct: 188 WKVCRATSATPSLFKPFSVVSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNG 247
Query: 557 VEDLLVLSLGNGSSNAKACENEKEKENHRTCSTPSVVGIVLDGVSETVDQMLGNAFCWNR 378
V+DLLVLSLGNG S + K + N ST SVV IV+DGVS+TVDQMLGNAFCWNR
Sbjct: 248 VDDLLVLSLGNGPSTMSSSPGRKLRRN-GDYSTSSVVDIVVDGVSDTVDQMLGNAFCWNR 306
Query: 377 TDYVRIQAFGLGTEVTTEEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVAATGKP 198
TDYVRIQA GL + EE+LKERG+E+ PFG KR+LTE+NG RI+ FVQRLV A+GK
Sbjct: 307 TDYVRIQANGLTS--GGAEELLKERGVETAPFGVKRILTESNGERIEGFVQRLV-ASGKS 363
Query: 197 SLPSSPCQVTAVTSLANGR 141
SLP SPC+ +AV LA+GR
Sbjct: 364 SLPPSPCKESAVNPLADGR 382
>ref|NP_567142.1| putative protein; protein id: At3g63200.1, supported by cDNA:
gi_15912226 [Arabidopsis thaliana]
gi|15912227|gb|AAL08247.1| AT3g63200/F16M2_50
[Arabidopsis thaliana] gi|24111291|gb|AAN46769.1|
At3g63200/F16M2_50 [Arabidopsis thaliana]
Length = 384
Score = 274 bits (700), Expect = 1e-72
Identities = 144/199 (72%), Positives = 163/199 (81%)
Frame = -2
Query: 737 WKVCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAVNG 558
WKVCRATSATPS F PF++ SVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFP+VNG
Sbjct: 190 WKVCRATSATPSLFKPFSVVSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNG 249
Query: 557 VEDLLVLSLGNGSSNAKACENEKEKENHRTCSTPSVVGIVLDGVSETVDQMLGNAFCWNR 378
V+DLLVLSLGNG S + K + N ST SVV IV+DGVS+TVDQMLGNAFCWNR
Sbjct: 250 VDDLLVLSLGNGPSTMSSSPGRKLRRN-GDYSTSSVVDIVVDGVSDTVDQMLGNAFCWNR 308
Query: 377 TDYVRIQAFGLGTEVTTEEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVAATGKP 198
TDYVRIQA GL + EE+LKERG+E+ PFG KR+LTE+NG RI+ FVQRLV A+GK
Sbjct: 309 TDYVRIQANGLTS--GGAEELLKERGVETAPFGVKRILTESNGERIEGFVQRLV-ASGKS 365
Query: 197 SLPSSPCQVTAVTSLANGR 141
SLP SPC+ +AV LA+GR
Sbjct: 366 SLPPSPCKESAVNPLADGR 384
>ref|NP_181455.1| patatin family; protein id: At2g39220.1, supported by cDNA:
gi_17065143 [Arabidopsis thaliana]
gi|7487050|pir||T02580 hypothetical protein At2g39220
[imported] - Arabidopsis thaliana
gi|3402683|gb|AAC28986.1| similar to latex allergen from
Hevea brasiliensis [Arabidopsis thaliana]
gi|17065144|gb|AAL32726.1| putative patatin protein
[Arabidopsis thaliana] gi|23397241|gb|AAN31902.1|
unknown protein [Arabidopsis thaliana]
Length = 499
Score = 145 bits (367), Expect = 5e-34
Identities = 90/208 (43%), Positives = 117/208 (55%), Gaps = 20/208 (9%)
Frame = -2
Query: 743 RAWKVCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAV 564
+ W+VCRAT A P F P + SVDGKT C AVDGGL M+NPTAAA+THVLHNK++FP V
Sbjct: 268 KLWEVCRATWAEPGVFEPVEMRSVDGKTRCVAVDGGLAMSNPTAAAITHVLHNKQEFPFV 327
Query: 563 NGVEDLLVLSLGNGSSNAKACENEKEKENHRTCSTPSVVGIVLDGVSETVDQMLGNAF-- 390
GVEDLLVLSLG G + +K + V I DG ++TVDQ + AF
Sbjct: 328 RGVEDLLVLSLGTGQLVDVKYDCDKVMKWKAKHWARPAVRISADGAADTVDQAVSMAFGQ 387
Query: 389 CWNRTDYVRIQAFG------------------LGTEVTTEEEVLKERGLESLPFGGKRLL 264
C R++YVRIQA G + V EE+LK++ ES+ FGGK++
Sbjct: 388 C-RRSNYVRIQANGSSFGPCKPNIDTDASPSNVNMLVGVAEEMLKQKNAESVLFGGKKIN 446
Query: 263 TETNGNRIDSFVQRLVAATGKPSLPSSP 180
E+N ++D LV + S +P
Sbjct: 447 EESNYEKLDWLAGELVLEHQRRSCRIAP 474
>gb|AAN41269.1| unknown protein [Arabidopsis thaliana]
Length = 525
Score = 135 bits (339), Expect = 8e-31
Identities = 86/203 (42%), Positives = 112/203 (54%), Gaps = 19/203 (9%)
Frame = -2
Query: 731 VCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAVNGVE 552
+CRAT A P F P SVDGKT C AV GGL M+NPTAAA+THV HNK++FPAV GVE
Sbjct: 296 ICRATWAEPGTFDPVRTCSVDGKTRCVAVGGGLAMSNPTAAAITHVFHNKQEFPAVKGVE 355
Query: 551 DLLVLSLGNGSSNAKACENEKEKENHRTCSTPSVVGIVLDGVSETVDQMLGNAF-CWNRT 375
DLLVLSLG G + E+ K + I DG +E VDQ + F + +
Sbjct: 356 DLLVLSLGTGQLFEVNYDYEQVKNWRVKEWARPMARISGDGSAEFVDQAVAMGFGPYRSS 415
Query: 374 DYVRIQAFG-----LGTEVTTE-------------EEVLKERGLESLPFGGKRLLTETNG 249
+YVRIQA G G V T+ +E+LK+ +ES+ FG KR+ +N
Sbjct: 416 NYVRIQANGSRLGACGPNVDTDPRAENVKKLTEIADEMLKQNNVESVLFGSKRIGEMSNS 475
Query: 248 NRIDSFVQRLVAATGKPSLPSSP 180
+I+ F LV + S+ +SP
Sbjct: 476 EKIEWFASELVIEQQRRSVRASP 498
>ref|NP_191055.1| patatin-related; protein id: At3g54950.1 [Arabidopsis thaliana]
gi|7486343|pir||T06725 hypothetical protein F28P10.70 -
Arabidopsis thaliana gi|4678298|emb|CAB41089.1| putative
protein [Arabidopsis thaliana]
Length = 488
Score = 134 bits (336), Expect = 2e-30
Identities = 87/196 (44%), Positives = 117/196 (59%), Gaps = 20/196 (10%)
Frame = -2
Query: 743 RAWKVCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAV 564
R +VCRAT A P F P + SVDG+T C AV GGL M+NPTAAA+THVLHNK++FP V
Sbjct: 255 RLSEVCRATWAEPGVFEPVEMKSVDGQTKCVAVGGGLAMSNPTAAAITHVLHNKQEFPFV 314
Query: 563 NGVEDLLVLSLGNGSSNAKACENEK-EKENHRTCSTPSVVGIVLDGVSETVDQMLGNAFC 387
GVEDLLVLSLG G + E ++ K + + P+ + I DG ++TVDQ + AF
Sbjct: 315 RGVEDLLVLSLGMGQLLDVSYEYDRIIKWKAKHWARPAAL-ISNDGAADTVDQAVAMAFG 373
Query: 386 WNR-TDYVRIQAFG--------------LGTEVT----TEEEVLKERGLESLPFGGKRLL 264
R ++YVRIQA G G+ V EE+LK++ +ES+ FGGKR+
Sbjct: 374 HCRSSNYVRIQANGSNLGPWSPNMDTDPSGSNVNMLMGVAEEMLKQKNVESVLFGGKRID 433
Query: 263 TETNGNRIDSFVQRLV 216
++N ++D LV
Sbjct: 434 EQSNFEKLDWLAGELV 449
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 724,496,418
Number of Sequences: 1393205
Number of extensions: 19335827
Number of successful extensions: 111706
Number of sequences better than 10.0: 615
Number of HSP's better than 10.0 without gapping: 78395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107287
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36314099463
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
