Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007036A_C01 KMC007036A_c01
(612 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD22151.1|AF061282_4 serine carboxypeptidase-like protein [S... 51 1e-05
sp|P55747|CP21_HORVU Serine carboxypeptidase II-1 precursor (CP-... 49 5e-05
dbj|BAB92923.1| putative carboxypeptidase D [Oryza sativa (japon... 49 5e-05
gb|AAL69391.1|AF462228_1 putative serine carboxypeptidase [Narci... 48 1e-04
gb|AAD22164.1|AF061282_18 serine carboxypeptidase [Sorghum bicolor] 47 2e-04
>gb|AAD22151.1|AF061282_4 serine carboxypeptidase-like protein [Sorghum bicolor]
Length = 657
Score = 50.8 bits (120), Expect = 1e-05
Identities = 23/30 (76%), Positives = 25/30 (82%)
Frame = -1
Query: 483 GHYVPLLAQLVCRTNKGVNNPNINFKGFMV 394
GHYVP L+QLV R N GV NP+INFKGFMV
Sbjct: 365 GHYVPQLSQLVYRNNIGVENPSINFKGFMV 394
>sp|P55747|CP21_HORVU Serine carboxypeptidase II-1 precursor (CP-MII.1)
gi|619352|gb|AAB31591.1| CP-MII.1=serine
carboxypeptidase [Hordeum vulgare=barley, cv. Alexis,
aleurone, Peptide, 324 aa] gi|6093206|emb|CAB58992.1|
serine carboxypeptidase II-1 [Hordeum vulgare subsp.
vulgare]
Length = 324
Score = 48.9 bits (115), Expect = 5e-05
Identities = 22/30 (73%), Positives = 24/30 (79%)
Frame = -1
Query: 483 GHYVPLLAQLVCRTNKGVNNPNINFKGFMV 394
GHYVP L+QLV R NKGV P +NFKGFMV
Sbjct: 44 GHYVPQLSQLVHRNNKGVRKPILNFKGFMV 73
>dbj|BAB92923.1| putative carboxypeptidase D [Oryza sativa (japonica
cultivar-group)]
Length = 669
Score = 48.9 bits (115), Expect = 5e-05
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = -1
Query: 543 QNYAELCFREFSDRVKHWITGHYVPLLAQLVCRTNKGVNNPNINFKGFMV 394
+ + + +REF + + GHYVP LAQL+ NKG+ NP IN KGFMV
Sbjct: 378 ERFPQYKYREFYIAGESY-AGHYVPQLAQLIYEQNKGIQNPIINLKGFMV 426
>gb|AAL69391.1|AF462228_1 putative serine carboxypeptidase [Narcissus pseudonarcissus]
Length = 81
Score = 47.8 bits (112), Expect = 1e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 483 GHYVPLLAQLVCRTNKGVNNPNINFKGFMV 394
GHYVP L+QL+ R NK + NP INFKGFMV
Sbjct: 39 GHYVPQLSQLIYRKNKVIQNPFINFKGFMV 68
>gb|AAD22164.1|AF061282_18 serine carboxypeptidase [Sorghum bicolor]
Length = 362
Score = 47.0 bits (110), Expect = 2e-04
Identities = 22/30 (73%), Positives = 24/30 (79%)
Frame = -1
Query: 483 GHYVPLLAQLVCRTNKGVNNPNINFKGFMV 394
GHYVP L+QLV R N GV+ P INFKGFMV
Sbjct: 181 GHYVPQLSQLVYRRNIGVDKPIINFKGFMV 210
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,743,956
Number of Sequences: 1393205
Number of extensions: 9976572
Number of successful extensions: 24822
Number of sequences better than 10.0: 224
Number of HSP's better than 10.0 without gapping: 24163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24808
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
