Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC007010A_C01 KMC007010A_c01
(681 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197446.1| calcium-dependent protein kinase; protein id: A... 199 2e-50
ref|NP_568281.1| calcium-dependent protein kinase-like protein; ... 191 6e-48
dbj|BAC55673.1| putative calcium-dependent protein kinase [Oryza... 187 9e-47
gb|AAB88537.1| calcium-dependent protein kinase [Fragaria x anan... 187 9e-47
ref|NP_181717.1| putative calcium-dependent protein kinase; prot... 185 6e-46
>ref|NP_197446.1| calcium-dependent protein kinase; protein id: At5g19450.1,
supported by cDNA: gi_836941 [Arabidopsis thaliana]
gi|2129551|pir||S71778 calcium-dependent protein kinase
(EC 2.7.1.-) 19 - Arabidopsis thaliana
gi|836942|gb|AAA67655.1| calcium-dependent protein
kinase [Arabidopsis thaliana] gi|836948|gb|AAA67658.1|
calcium-dependent protein kinase [Arabidopsis thaliana]
Length = 533
Score = 199 bits (507), Expect = 2e-50
Identities = 97/118 (82%), Positives = 107/118 (90%)
Frame = -2
Query: 677 LNYGEFVAISVHLRKMGNDEHLIKAFKFFDANQSGYIEIEELRDALSDEVETNSEEVISA 498
LNYGEFVA+SVHL+KM NDEHL KAF FFD NQS YIEIEELR+AL+DEV+TNSEEV++A
Sbjct: 415 LNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAA 474
Query: 497 IMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSLSLMRDGSLQVNNE 324
IM DVDTDKDG+ISYEEFA MMKAGTDWRKASRQYSRERF SLSL LMR+GSLQ+ E
Sbjct: 475 IMQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQLEGE 532
>ref|NP_568281.1| calcium-dependent protein kinase-like protein; protein id:
At5g12480.1, supported by cDNA: gi_13605616, supported
by cDNA: gi_1399276 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247.1| calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|13605617|gb|AAK32802.1|AF361634_1 AT5g19450/F7K24_200
[Arabidopsis thaliana] gi|14586378|emb|CAC42909.1|
calcium-dependent protein kinase-like protein
[Arabidopsis thaliana]
Length = 535
Score = 191 bits (486), Expect = 6e-48
Identities = 95/119 (79%), Positives = 106/119 (88%), Gaps = 1/119 (0%)
Frame = -2
Query: 677 LNYGEFVAISVHLRKMGNDEHLIKAFKFFDANQSGYIEIEELRDALSDEVE-TNSEEVIS 501
LNY EFVA+SVHL+KM NDEHL KAF FFD NQSGYIEI+ELR+AL+DE++ T+SEEVI+
Sbjct: 416 LNYSEFVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIA 475
Query: 500 AIMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSLSLMRDGSLQVNNE 324
AIM DVDTDKDG+ISYEEF MMKAGTDWRKASRQYSRERF SLSL LMRDGSLQ+ E
Sbjct: 476 AIMQDVDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQLEGE 534
Score = 40.0 bits (92), Expect = 0.030
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -2
Query: 608 KAFKFFDANQSGYIEIEELRDALSDEVETNSEEVISAIMHDVDTDKDGKISYEEFATM 435
+AF+ D N+ G I +EEL+ L + ++ + +M D D DG ++Y EF +
Sbjct: 367 EAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAV 424
>dbj|BAC55673.1| putative calcium-dependent protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 547
Score = 187 bits (476), Expect = 9e-47
Identities = 90/115 (78%), Positives = 105/115 (91%)
Frame = -2
Query: 677 LNYGEFVAISVHLRKMGNDEHLIKAFKFFDANQSGYIEIEELRDALSDEVETNSEEVISA 498
L+YGEFVA+SVHLRK+GNDEHL KAF +FD NQSGYIEI+ELR++L+D++ N EEVI+A
Sbjct: 429 LDYGEFVALSVHLRKIGNDEHLHKAFAYFDRNQSGYIEIDELRESLADDLGANHEEVINA 488
Query: 497 IMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSLSLMRDGSLQV 333
I+ DVDTDKDGKISY+EFA MMKAGTDWRKASRQYSRERFTSLSL L +DGSLQ+
Sbjct: 489 IIRDVDTDKDGKISYDEFAAMMKAGTDWRKASRQYSRERFTSLSLKLQKDGSLQL 543
>gb|AAB88537.1| calcium-dependent protein kinase [Fragaria x ananassa]
Length = 529
Score = 187 bits (476), Expect = 9e-47
Identities = 95/122 (77%), Positives = 107/122 (86%), Gaps = 1/122 (0%)
Frame = -2
Query: 680 YLNYGEFVAISVHLRKMGND-EHLIKAFKFFDANQSGYIEIEELRDALSDEVETNSEEVI 504
YL+YGEFVAISVHLR+MGND EHL KAF FFD N+SG+IE+EELR AL+ EV+ + E+VI
Sbjct: 408 YLDYGEFVAISVHLRRMGNDDEHLRKAFDFFDQNKSGFIEVEELRTALATEVDDHVEDVI 467
Query: 503 SAIMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSLSLMRDGSLQVNNE 324
SAI+ DVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERF SLSL LMRDGSL+ E
Sbjct: 468 SAIISDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLEGKTE 527
Query: 323 KQ 318
+
Sbjct: 528 SK 529
Score = 34.3 bits (77), Expect = 1.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 608 KAFKFFDANQSGYIEIEELRDALSDEVETNSEEVISAIMHDVDTDKDGKISYEEFATM 435
+ FK D + G I I+ELR L + + +M D D DG + Y EF +
Sbjct: 360 EGFKIMDTSNKGKINIDELRVGLHKLGHQIPDADVHILMEAGDVDNDGYLDYGEFVAI 417
>ref|NP_181717.1| putative calcium-dependent protein kinase; protein id: At2g41860.1
[Arabidopsis thaliana] gi|25287680|pir||A84847 probable
Ca2+ dependent protein kinase [imported] - Arabidopsis
thaliana gi|1871195|gb|AAB63555.1| putative
calcium-dependent protein kinase [Arabidopsis thaliana]
gi|20196892|gb|AAM14824.1| putative calcium-dependent
protein kinase [Arabidopsis thaliana]
Length = 530
Score = 185 bits (469), Expect = 6e-46
Identities = 90/119 (75%), Positives = 104/119 (86%)
Frame = -2
Query: 680 YLNYGEFVAISVHLRKMGNDEHLIKAFKFFDANQSGYIEIEELRDALSDEVETNSEEVIS 501
YL+ EFVAISVH+RK+GNDEHL KAF FFD N+SGYIEIEELRDAL+D+V+T SEEV+
Sbjct: 410 YLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVE 469
Query: 500 AIMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSLSLMRDGSLQVNNE 324
AI+ DVDT+KDGKISY+EFATMMK GTDWRKASRQYSR+ F LSL LM+DGSLQ N +
Sbjct: 470 AIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQDGSLQSNGD 528
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 580,228,571
Number of Sequences: 1393205
Number of extensions: 12508791
Number of successful extensions: 37880
Number of sequences better than 10.0: 1436
Number of HSP's better than 10.0 without gapping: 34717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37353
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30270070164
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
