Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006986A_C01 KMC006986A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA33810.1| phi-1 [Nicotiana tabacum] 103 4e-30
ref|NP_192634.1| putative phi-1-like phosphate-induced protein; ... 110 8e-24
gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Ar... 110 8e-24
ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; pr... 99 8e-24
gb|AAG40350.1|AF324998_1 At1g35140 [Arabidopsis thaliana] 99 8e-24
>dbj|BAA33810.1| phi-1 [Nicotiana tabacum]
Length = 313
Score = 103 bits (257), Expect(2) = 4e-30
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = +3
Query: 282 SSPISQTNQPSVATWWKTTEKYYQLTSKKKTTTPRLSLSLGKQILDEKYSLGKSVTSKHL 461
SS PSVA WWKTTEKYY L + KK+ LSL LGKQ+L E YSLGKS+T K +
Sbjct: 76 SSSTPSKTDPSVAKWWKTTEKYYHLANSKKS----LSLYLGKQVLVENYSLGKSLTQKQI 131
Query: 462 VELASKGEQRNAINVVLTSSDVA 530
V+LASKGEQ++AIN+VLT+SDVA
Sbjct: 132 VQLASKGEQKDAINIVLTASDVA 154
Score = 49.3 bits (116), Expect(2) = 4e-30
Identities = 27/66 (40%), Positives = 40/66 (59%)
Frame = +1
Query: 70 LLKIFLLICVCHLSFASRRLNERGSGPVPATSIPQRSLGYTARISVNLIWYGQFKSALKR 249
+LK+FL+I C++ FASR+L P + +ISVNLIWYG+FK + +R
Sbjct: 7 ILKLFLVISFCNVCFASRKLTALVQEPENQLLQYHKGALLFGKISVNLIWYGKFKPS-QR 65
Query: 250 PVVSEF 267
+VS+F
Sbjct: 66 AIVSDF 71
>ref|NP_192634.1| putative phi-1-like phosphate-induced protein; protein id:
At4g08950.1, supported by cDNA: 3552., supported by
cDNA: gi_15450811, supported by cDNA: gi_20259893,
supported by cDNA: gi_20271141 [Arabidopsis thaliana]
gi|25371901|pir||C85090 probable phi-1-like
phosphate-induced protein [imported] - Arabidopsis
thaliana gi|4325369|gb|AAD17365.1| T3H13.3 gene product
[Arabidopsis thaliana] gi|7267537|emb|CAB78019.1|
putative phi-1-like phosphate-induced protein
[Arabidopsis thaliana] gi|15450812|gb|AAK96677.1|
Unknown protein [Arabidopsis thaliana]
gi|20259894|gb|AAM13294.1| unknown protein [Arabidopsis
thaliana] gi|20271142|gb|AAM18526.1|AF496655_1 cell
cycle-related protein [Arabidopsis thaliana]
Length = 314
Score = 110 bits (276), Expect = 8e-24
Identities = 58/89 (65%), Positives = 73/89 (81%), Gaps = 1/89 (1%)
Frame = +3
Query: 264 VSSPPWSSPISQT-NQPSVATWWKTTEKYYQLTSKKKTTTPRLSLSLGKQILDEKYSLGK 440
++S +SP S+T +QPSVATWWKTTEKYY+L + K ++P LSL+LGKQI+DE SLGK
Sbjct: 69 ITSLTHTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSP-LSLTLGKQIIDESCSLGK 127
Query: 441 SVTSKHLVELASKGEQRNAINVVLTSSDV 527
S+T K + LASKG+QRNAINVVLTS+DV
Sbjct: 128 SLTDKKIQTLASKGDQRNAINVVLTSADV 156
Score = 40.8 bits (94), Expect = 0.010
Identities = 24/81 (29%), Positives = 43/81 (52%)
Frame = +1
Query: 70 LLKIFLLICVCHLSFASRRLNERGSGPVPATSIPQRSLGYTARISVNLIWYGQFKSALKR 249
+ K+FL + + +S ++R L + + +L + +ISVNLIWYG+FK + +R
Sbjct: 5 VFKLFLFLSLLQISVSARNLASQEPNQFQLLKYHKGAL-LSGKISVNLIWYGKFKPS-QR 62
Query: 250 PVVSEFHHLPGHPQSARQTNH 312
++S+F H +T H
Sbjct: 63 AIISDFITSLTHTSPTSKTLH 83
>gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Arabidopsis
thaliana]
Length = 314
Score = 110 bits (276), Expect = 8e-24
Identities = 58/89 (65%), Positives = 73/89 (81%), Gaps = 1/89 (1%)
Frame = +3
Query: 264 VSSPPWSSPISQT-NQPSVATWWKTTEKYYQLTSKKKTTTPRLSLSLGKQILDEKYSLGK 440
++S +SP S+T +QPSVATWWKTTEKYY+L + K ++P LSL+LGKQI+DE SLGK
Sbjct: 69 ITSLTHTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSP-LSLTLGKQIIDESCSLGK 127
Query: 441 SVTSKHLVELASKGEQRNAINVVLTSSDV 527
S+T K + LASKG+QRNAINVVLTS+DV
Sbjct: 128 SLTDKKIQTLASKGDQRNAINVVLTSADV 156
Score = 43.1 bits (100), Expect = 0.002
Identities = 25/85 (29%), Positives = 46/85 (53%)
Frame = +1
Query: 58 IFSKLLKIFLLICVCHLSFASRRLNERGSGPVPATSIPQRSLGYTARISVNLIWYGQFKS 237
++S + K+FL + + +S ++R L + + +L + +ISVNLIWYG+FK
Sbjct: 1 MYSLVFKLFLFLSLLQISVSARNLASQEPNQFQLLKYHKGAL-LSGKISVNLIWYGKFKP 59
Query: 238 ALKRPVVSEFHHLPGHPQSARQTNH 312
+ +R ++S+F H +T H
Sbjct: 60 S-QRAIISDFITSLTHTSPTSKTLH 83
>ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; protein id:
At1g35140.1, supported by cDNA: 118937., supported by
cDNA: gi_13358189 [Arabidopsis thaliana]
gi|25371902|pir||H86471 probable phosphate-induced
(phi-1) protein [imported] - Arabidopsis thaliana
gi|12320953|gb|AAG50598.1|AC079605_3 phosphate-induced
(phi-1) protein, putative [Arabidopsis thaliana]
gi|21537055|gb|AAM61396.1| phosphate-induced protein
phi-1, putative [Arabidopsis thaliana]
Length = 309
Score = 99.4 bits (246), Expect(2) = 8e-24
Identities = 53/88 (60%), Positives = 65/88 (73%)
Frame = +3
Query: 264 VSSPPWSSPISQTNQPSVATWWKTTEKYYQLTSKKKTTTPRLSLSLGKQILDEKYSLGKS 443
V+S S + PSVATWWKT EKYYQ +K TTT LSLSLG+QILD+ YS+GKS
Sbjct: 66 VASLSSSRRSTMAQNPSVATWWKTVEKYYQF--RKMTTTRGLSLSLGEQILDQGYSMGKS 123
Query: 444 VTSKHLVELASKGEQRNAINVVLTSSDV 527
+T K+L +LA+KG Q A+NVVLTS+DV
Sbjct: 124 LTEKNLKDLAAKGGQSYAVNVVLTSADV 151
Score = 32.3 bits (72), Expect(2) = 8e-24
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 190 TARISVNLIWYGQFKSALKRPVVSEF 267
T +S+NLIWYG+FK + +R +V++F
Sbjct: 41 TGDVSINLIWYGKFKPS-QRAIVTDF 65
>gb|AAG40350.1|AF324998_1 At1g35140 [Arabidopsis thaliana]
Length = 244
Score = 99.4 bits (246), Expect(2) = 8e-24
Identities = 53/88 (60%), Positives = 65/88 (73%)
Frame = +3
Query: 264 VSSPPWSSPISQTNQPSVATWWKTTEKYYQLTSKKKTTTPRLSLSLGKQILDEKYSLGKS 443
V+S S + PSVATWWKT EKYYQ +K TTT LSLSLG+QILD+ YS+GKS
Sbjct: 66 VASLSSSRRSTMAQNPSVATWWKTVEKYYQF--RKMTTTRGLSLSLGEQILDQGYSMGKS 123
Query: 444 VTSKHLVELASKGEQRNAINVVLTSSDV 527
+T K+L +LA+KG Q A+NVVLTS+DV
Sbjct: 124 LTEKNLKDLAAKGGQSYAVNVVLTSADV 151
Score = 32.3 bits (72), Expect(2) = 8e-24
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 190 TARISVNLIWYGQFKSALKRPVVSEF 267
T +S+NLIWYG+FK + +R +V++F
Sbjct: 41 TGDVSINLIWYGKFKPS-QRAIVTDF 65
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,727,032
Number of Sequences: 1393205
Number of extensions: 10782669
Number of successful extensions: 48620
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 41597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47782
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
