Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006934A_C01 KMC006934A_c01
(436 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD42963.2|AF141384_1 serine carboxypeptidase precursor [Matr... 168 1e-41
emb|CAC86383.1| carboxypeptidase type III [Theobroma cacao] 167 4e-41
gb|AAL67992.1| putative serine carboxypeptidase precursor [Gossy... 164 3e-40
ref|NP_187652.1| putative serine carboxypeptidase precursor; pro... 148 1e-35
gb|AAB04606.1| carboxypeptidase Y-like protein gi|445120|prf||19... 148 1e-35
>gb|AAD42963.2|AF141384_1 serine carboxypeptidase precursor [Matricaria chamomilla]
Length = 501
Score = 168 bits (426), Expect = 1e-41
Identities = 87/148 (58%), Positives = 107/148 (71%), Gaps = 14/148 (9%)
Frame = +2
Query: 35 PLLLLFLLPLLLSP------------PSIEANNLIRDLNLFPPRDVNILTDPNLALPPSN 178
PL LFL L+L+ PS +A++LIR LNLFP VN++ + + ++
Sbjct: 3 PLFSLFLSLLILAQSSSSLPLPQTILPSTQASSLIRGLNLFPKHAVNLVEEDDYVRNNNS 62
Query: 179 NTTRIVEKPLRFPNVL--GGVSLDDLAHRAGYYPIQHSHAARMFYFFFESRNSKKDPVVI 352
+IVEK RFPN + GV+++DL H AGYY IQHSHAA+MFYFFFESRN+KKDPVVI
Sbjct: 63 LDKKIVEKLFRFPNFVESDGVTVEDLGHHAGYYQIQHSHAAKMFYFFFESRNNKKDPVVI 122
Query: 353 WLTGGPGCSSELAVFYENGPFKIADNMS 436
WLTGGPGCSSELA+FYENGPFKIADNM+
Sbjct: 123 WLTGGPGCSSELALFYENGPFKIADNMT 150
>emb|CAC86383.1| carboxypeptidase type III [Theobroma cacao]
Length = 508
Score = 167 bits (422), Expect = 4e-41
Identities = 82/122 (67%), Positives = 97/122 (79%), Gaps = 2/122 (1%)
Frame = +2
Query: 77 PSIEANNLIRDLNLFPPRDVNILTDPNLALPPSNNTTRIVEKPLRFPN--VLGGVSLDDL 250
PSI A LIR+LNLFP +VN++ ++LP + R+VEK +FPN V GGVS++DL
Sbjct: 40 PSIHAKKLIRELNLFPKEEVNVVDGGQVSLPEDS---RLVEKRFKFPNLAVPGGVSVEDL 96
Query: 251 AHRAGYYPIQHSHAARMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFKIADN 430
H AGYY + +SH ARMFYFFFESRNSKKDPVVIWLTGGPGCSSELA+FYENGPF IA+N
Sbjct: 97 GHHAGYYKLANSHDARMFYFFFESRNSKKDPVVIWLTGGPGCSSELALFYENGPFTIAEN 156
Query: 431 MS 436
MS
Sbjct: 157 MS 158
>gb|AAL67992.1| putative serine carboxypeptidase precursor [Gossypium hirsutum]
Length = 507
Score = 164 bits (414), Expect = 3e-40
Identities = 80/122 (65%), Positives = 95/122 (77%), Gaps = 2/122 (1%)
Frame = +2
Query: 77 PSIEANNLIRDLNLFPPRDVNILTDPNLALPPSNNTTRIVEKPLRFPN--VLGGVSLDDL 250
PS+ A LIR+LNLFP +VN++ + ++LP ++VEK +FP V GGVS +DL
Sbjct: 39 PSVHAKKLIRELNLFPKGEVNVVDEHRVSLPEG---PKLVEKRFKFPTLEVPGGVSFEDL 95
Query: 251 AHRAGYYPIQHSHAARMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFKIADN 430
H AGYY + +SH ARMFYFFFESRNSKKDPVVIWLTGGPGCSSELA+FYENGPF IADN
Sbjct: 96 GHHAGYYKLPNSHDARMFYFFFESRNSKKDPVVIWLTGGPGCSSELALFYENGPFTIADN 155
Query: 431 MS 436
MS
Sbjct: 156 MS 157
>ref|NP_187652.1| putative serine carboxypeptidase precursor; protein id:
At3g10410.1, supported by cDNA: gi_20147198 [Arabidopsis
thaliana] gi|20455475|sp|P32826|CBPX_ARATH Serine
carboxypeptidase precursor
gi|12322792|gb|AAG51389.1|AC011560_21 putative serine
carboxypeptidase precursor; 109294-111839 [Arabidopsis
thaliana] gi|20147199|gb|AAM10315.1| AT3g10410/F13M14_32
[Arabidopsis thaliana] gi|23506193|gb|AAN31108.1|
At3g10410/F13M14_32 [Arabidopsis thaliana]
Length = 516
Score = 148 bits (374), Expect = 1e-35
Identities = 75/122 (61%), Positives = 87/122 (70%), Gaps = 2/122 (1%)
Frame = +2
Query: 77 PSIEANNLIRDLNLFPPRDVNILTDPNLALPPSNNTTRIVEKPLRFPNVL--GGVSLDDL 250
PS A LIR+LNLFP +D+N++ +L L + IVE+ FPN+L GG ++DDL
Sbjct: 39 PSTRAEKLIRELNLFPQQDLNVIDVADLPLTAAEGPG-IVERKFVFPNILADGGPTVDDL 97
Query: 251 AHRAGYYPIQHSHAARMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFKIADN 430
H AGYY + S A MFYFFFESRN K PVVIWLTGGPGCSSELAVFYENGPFKI N
Sbjct: 98 GHHAGYYKLPKSRGASMFYFFFESRNKKDAPVVIWLTGGPGCSSELAVFYENGPFKITSN 157
Query: 431 MS 436
MS
Sbjct: 158 MS 159
>gb|AAB04606.1| carboxypeptidase Y-like protein gi|445120|prf||1908426A
carboxypeptidase Y
Length = 539
Score = 148 bits (374), Expect = 1e-35
Identities = 75/122 (61%), Positives = 87/122 (70%), Gaps = 2/122 (1%)
Frame = +2
Query: 77 PSIEANNLIRDLNLFPPRDVNILTDPNLALPPSNNTTRIVEKPLRFPNVL--GGVSLDDL 250
PS A LIR+LNLFP +D+N++ +L L + IVE+ FPN+L GG ++DDL
Sbjct: 39 PSTRAEKLIRELNLFPQQDLNVIDVADLPLTAAEGPG-IVERKFVFPNILADGGPTVDDL 97
Query: 251 AHRAGYYPIQHSHAARMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFKIADN 430
H AGYY + S A MFYFFFESRN K PVVIWLTGGPGCSSELAVFYENGPFKI N
Sbjct: 98 GHHAGYYKLPKSRGASMFYFFFESRNKKDAPVVIWLTGGPGCSSELAVFYENGPFKITSN 157
Query: 431 MS 436
MS
Sbjct: 158 MS 159
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,051,337
Number of Sequences: 1393205
Number of extensions: 11539801
Number of successful extensions: 220600
Number of sequences better than 10.0: 2455
Number of HSP's better than 10.0 without gapping: 86933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172971
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
