Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006929A_C01 KMC006929A_c01
(472 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08122 cysteine endopeptidase (EC 3.4.22.-) precursor - cas... 158 2e-38
emb|CAA40073.1| endopeptidase (EP-C1) [Phaseolus vulgaris] 157 5e-38
pir||S22502 cysteine proteinase (EC 3.4.22.-) - kidney bean 157 5e-38
sp|P25803|CYSP_PHAVU Vignain precursor (Bean endopeptidase) (Cys... 157 5e-38
sp|P43156|CYSP_HEMSP Thiol protease SEN102 precursor gi|1364024|... 157 5e-38
>pir||T08122 cysteine endopeptidase (EC 3.4.22.-) precursor - castor bean
gi|2944446|gb|AAC62396.1| cysteine endopeptidase
precursor [Ricinus communis]
Length = 360
Score = 158 bits (400), Expect = 2e-38
Identities = 79/109 (72%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = -1
Query: 472 PENNETALLLAAANQPVSVAVEAG-VDMQLYSEGVFMGGGVDCGTQLNHGVAIVGYGATQ 296
PEN+E ALL A ANQPVSVA++AG D Q YSEGVF G CGT+L+HGVAIVGYG T
Sbjct: 241 PENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGS---CGTELDHGVAIVGYGTTI 297
Query: 295 YGTKYWIVKNSWGAKWGEEGYIRMKRDISDKRGLCGIAMAPSYPIKSSS 149
GTKYW VKNSWG +WGE+GYIRM+R ISDK GLCGIAM SYPIK SS
Sbjct: 298 DGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSS 346
>emb|CAA40073.1| endopeptidase (EP-C1) [Phaseolus vulgaris]
Length = 361
Score = 157 bits (397), Expect = 5e-38
Identities = 78/109 (71%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = -1
Query: 472 PENNETALLLAAANQPVSVAVEAG-VDMQLYSEGVFMGGGVDCGTQLNHGVAIVGYGATQ 296
P N+E ALL A ANQPVSVA++AG D Q YSEGVF G DC T LNHGVAIVGYG T
Sbjct: 242 PANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG---DCSTDLNHGVAIVGYGTTV 298
Query: 295 YGTKYWIVKNSWGAKWGEEGYIRMKRDISDKRGLCGIAMAPSYPIKSSS 149
GT YWIV+NSWG +WGE GYIRM+R+IS K GLCGIAM PSYPIK+SS
Sbjct: 299 DGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPIKNSS 347
>pir||S22502 cysteine proteinase (EC 3.4.22.-) - kidney bean
Length = 362
Score = 157 bits (397), Expect = 5e-38
Identities = 78/109 (71%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = -1
Query: 472 PENNETALLLAAANQPVSVAVEAG-VDMQLYSEGVFMGGGVDCGTQLNHGVAIVGYGATQ 296
P N+E ALL A ANQPVSVA++AG D Q YSEGVF G DC T LNHGVAIVGYG T
Sbjct: 243 PANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG---DCSTDLNHGVAIVGYGTTV 299
Query: 295 YGTKYWIVKNSWGAKWGEEGYIRMKRDISDKRGLCGIAMAPSYPIKSSS 149
GT YWIV+NSWG +WGE GYIRM+R+IS K GLCGIAM PSYPIK+SS
Sbjct: 300 DGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPIKNSS 348
>sp|P25803|CYSP_PHAVU Vignain precursor (Bean endopeptidase) (Cysteine proteinase EP-C1)
gi|20994|emb|CAA44816.1| endopeptidase [Phaseolus
vulgaris]
Length = 362
Score = 157 bits (397), Expect = 5e-38
Identities = 78/109 (71%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = -1
Query: 472 PENNETALLLAAANQPVSVAVEAG-VDMQLYSEGVFMGGGVDCGTQLNHGVAIVGYGATQ 296
P N+E ALL A ANQPVSVA++AG D Q YSEGVF G DC T LNHGVAIVGYG T
Sbjct: 243 PANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG---DCSTDLNHGVAIVGYGTTV 299
Query: 295 YGTKYWIVKNSWGAKWGEEGYIRMKRDISDKRGLCGIAMAPSYPIKSSS 149
GT YWIV+NSWG +WGE GYIRM+R+IS K GLCGIAM PSYPIK+SS
Sbjct: 300 DGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPIKNSS 348
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 precursor gi|1364024|pir||S57777 cysteine
proteinase (EC 3.4.22.-) precursor - Hemerocallis x
hybrida (cv. Cradle Song) gi|396568|emb|CAA52425.1|
thiol-protease [Hemerocallis sp.]
Length = 360
Score = 157 bits (397), Expect = 5e-38
Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
Frame = -1
Query: 472 PENNETALLLAAANQPVSVAVEA-GVDMQLYSEGVFMGGGVDCGTQLNHGVAIVGYGATQ 296
P NNE AL+ A ANQP+SV++EA G Q YSEGVF G CGT+L+HGVAIVGYGAT+
Sbjct: 244 PANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGR---CGTELDHGVAIVGYGATR 300
Query: 295 YGTKYWIVKNSWGAKWGEEGYIRMKRDISDKRGLCGIAMAPSYPIKSSS 149
GTKYWIVKNSWG +WGE GYIRM+R ISDKRG CGIAM SYPIK+S+
Sbjct: 301 DGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPIKTSA 349
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 439,582,088
Number of Sequences: 1393205
Number of extensions: 9850380
Number of successful extensions: 28613
Number of sequences better than 10.0: 1093
Number of HSP's better than 10.0 without gapping: 26234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27541
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
