Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006684A_C01 KMC006684A_c01
(462 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF68254.1|AF206526_2 seroreactive antigen BMN1-17B [Babesia ... 33 1.1
gb|AAM48586.1| sporozoite cysteine-rich protein [Cryptosporidium... 33 1.4
gb|AAC16621.3| sporozoite cysteine-rich protein [Cryptosporidium... 33 1.4
ref|NP_704593.1| hypothetical protein [Plasmodium falciparum 3D7... 31 7.1
>gb|AAF68254.1|AF206526_2 seroreactive antigen BMN1-17B [Babesia microti]
Length = 206
Score = 33.5 bits (75), Expect = 1.1
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Frame = -2
Query: 365 VNETLSISFLFPLFFLMLFFFLDCYVRFRDLYNVAVHDKMKRVEDI*KITKE*RCSLQAT 186
++ + I F+ P FF + +FL C R +++ R++ + C L+
Sbjct: 56 ISTFILIDFVMP-FFTLFTYFLRCLSIMRFSFSLLT---FIRIDFVMPFFMSVTCFLRCL 111
Query: 185 SMF*FMIYKQT*IVVS---PFQTAVFFFYKI*SMYQVLLYPITFLIVSFVF----CFKYW 27
S+ F T I++ PF T +F + S+ + TF+++ FV F Y+
Sbjct: 112 SIIRFYSSISTFILIDFVMPFFTLFTYFLRCLSIIRFYSSISTFILIDFVMPFFTLFTYF 171
Query: 26 LKCL 15
L+CL
Sbjct: 172 LRCL 175
>gb|AAM48586.1| sporozoite cysteine-rich protein [Cryptosporidium parvum]
gi|21914364|gb|AAM81353.1|AF522505_1 sporozoite
cysteine-rich protein [Cryptosporidium parvum]
Length = 338
Score = 33.1 bits (74), Expect = 1.4
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = -1
Query: 435 QFSHPRLNTEYPQWSFGIFCTGCCERDIVHFLSFPLIFLNVVFLLGLLC*I*RSI*CCSS 256
+F+ L+ EY QWS + CT C + +P LN V GL C I I C+S
Sbjct: 96 RFAISTLDCEYSQWSSWLPCTSTCNGGTTYRWRYP---LNEVMAGGLECTITSQISACNS 152
>gb|AAC16621.3| sporozoite cysteine-rich protein [Cryptosporidium parvum]
gi|28395501|gb|AAO39050.1| TSP1 domain-containing
protein TSP8 precursor [Cryptosporidium parvum]
Length = 614
Score = 33.1 bits (74), Expect = 1.4
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = -1
Query: 435 QFSHPRLNTEYPQWSFGIFCTGCCERDIVHFLSFPLIFLNVVFLLGLLC*I*RSI*CCSS 256
+F+ L+ EY QWS + CT C + +P LN V GL C I I C+S
Sbjct: 372 RFAISTLDCEYSQWSSWLPCTSTCNGGTTYRWRYP---LNEVMAGGLECTITSQISACNS 428
>ref|NP_704593.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23504952|emb|CAD51736.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 2112
Score = 30.8 bits (68), Expect = 7.1
Identities = 27/87 (31%), Positives = 41/87 (47%)
Frame = +3
Query: 90 VHRSYFIKKKHCSLKRGDYNSSLLVDHKLKHTCSLEAASSFLGDFLDILHSLHLVMNCNI 269
+ +S K ++ SL R +YNSSL +D K DIL+SL +N N+
Sbjct: 985 IFKSQLNKYRNSSLHRDEYNSSLDIDSMYKQLLK------------DILNSL---LNMNL 1029
Query: 270 I*ISKSNITIQEEKQH*EK*GEKKGNG 350
I+K NI + ++ + E KG G
Sbjct: 1030 S-ITKENIRKNTKTENLKNGNEGKGAG 1055
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 385,222,043
Number of Sequences: 1393205
Number of extensions: 7862313
Number of successful extensions: 24062
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24014
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11998661767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
