Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006680A_C01 KMC006680A_c01
(528 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA04768.1| acyl carrier protein [Fragaria vesca] 155 3e-37
sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplast precurs... 155 4e-37
gb|AAC39495.1| acyl carrier protein [Fragaria x ananassa] 152 2e-36
gb|AAL25091.1|AF428256_1 acyl carrier protein [Olea europaea] 151 5e-36
gb|AAD21198.1| acyl carrier protein [Capsicum chinense] 147 6e-35
>emb|CAA04768.1| acyl carrier protein [Fragaria vesca]
Length = 141
Score = 155 bits (392), Expect = 3e-37
Identities = 79/101 (78%), Positives = 90/101 (88%)
Frame = -1
Query: 525 NGRIFPSITMQPRAPRLQVACAAKPETVEKVCAIVKKQLALPEDSTVTGESKFTTLGADS 346
NGR S +Q R+ RLQ+ CAAKPETV+KVC IV+KQLALP+DS V+GESKF+ LGADS
Sbjct: 37 NGRSSLSFGLQQRSVRLQICCAAKPETVDKVCQIVRKQLALPDDSAVSGESKFSALGADS 96
Query: 345 LDTVEIVMGLEEEFGISVEEESAQSIATVQDAADMIDKLLE 223
LDTVEIVMGLEEEFGISVEEESAQSIATVQDAAD+I+KL+E
Sbjct: 97 LDTVEIVMGLEEEFGISVEEESAQSIATVQDAADLIEKLIE 137
>sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplast precursor (ACP 1)
gi|7442268|pir||T09583 acyl carrier protein - swamp oak
gi|1838961|emb|CAA71885.1| acyl carrier protein
[Casuarina glauca]
Length = 136
Score = 155 bits (391), Expect = 4e-37
Identities = 81/105 (77%), Positives = 91/105 (86%)
Frame = -1
Query: 528 MNGRIFPSITMQPRAPRLQVACAAKPETVEKVCAIVKKQLALPEDSTVTGESKFTTLGAD 349
+ G+ F + M R+ R V CAAKPETVEKVCAIVKKQLALP+DS VTGESKF TLGAD
Sbjct: 33 IKGKSFAPLRM--RSARFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGAD 90
Query: 348 SLDTVEIVMGLEEEFGISVEEESAQSIATVQDAADMIDKLLESKA 214
SLDTVEIVMGLEEEFGI+VEEESAQSIATVQDAAD+I+KL+E K+
Sbjct: 91 SLDTVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKKS 135
>gb|AAC39495.1| acyl carrier protein [Fragaria x ananassa]
Length = 141
Score = 152 bits (384), Expect = 2e-36
Identities = 77/101 (76%), Positives = 89/101 (87%)
Frame = -1
Query: 525 NGRIFPSITMQPRAPRLQVACAAKPETVEKVCAIVKKQLALPEDSTVTGESKFTTLGADS 346
NGR S +Q R+ RLQ+ CAAKPET++KVC IV+KQLALP+DS V+GESKF+ LGADS
Sbjct: 37 NGRSSLSFGLQKRSARLQIYCAAKPETMDKVCQIVRKQLALPDDSAVSGESKFSALGADS 96
Query: 345 LDTVEIVMGLEEEFGISVEEESAQSIATVQDAADMIDKLLE 223
LDTVEIVMGLEEEFG SVEEESAQSIATVQDAAD+I+KL+E
Sbjct: 97 LDTVEIVMGLEEEFGFSVEEESAQSIATVQDAADLIEKLIE 137
>gb|AAL25091.1|AF428256_1 acyl carrier protein [Olea europaea]
Length = 134
Score = 151 bits (381), Expect = 5e-36
Identities = 78/104 (75%), Positives = 89/104 (85%)
Frame = -1
Query: 525 NGRIFPSITMQPRAPRLQVACAAKPETVEKVCAIVKKQLALPEDSTVTGESKFTTLGADS 346
+G+ FPS+ +QP R ++ACAAKPETVEKVC IV+KQLALP DS VTGESKF +LGADS
Sbjct: 33 SGKSFPSLRLQPS--RFRIACAAKPETVEKVCEIVRKQLALPADSAVTGESKFASLGADS 90
Query: 345 LDTVEIVMGLEEEFGISVEEESAQSIATVQDAADMIDKLLESKA 214
LDTVEIVMGLEEEFGISVEEESAQ+I TVQ+AADMI+ L KA
Sbjct: 91 LDTVEIVMGLEEEFGISVEEESAQTITTVQEAADMIENLKAKKA 134
>gb|AAD21198.1| acyl carrier protein [Capsicum chinense]
Length = 132
Score = 147 bits (372), Expect = 6e-35
Identities = 75/104 (72%), Positives = 86/104 (82%)
Frame = -1
Query: 528 MNGRIFPSITMQPRAPRLQVACAAKPETVEKVCAIVKKQLALPEDSTVTGESKFTTLGAD 349
+ G FPS+ M+P RL + CAAKPETV+KVCAIVKKQLALP DS V GESKF LGAD
Sbjct: 28 IKGISFPSLRMKPATRRLSINCAAKPETVDKVCAIVKKQLALPGDSVVNGESKFAALGAD 87
Query: 348 SLDTVEIVMGLEEEFGISVEEESAQSIATVQDAADMIDKLLESK 217
SLDTVEIVMGLEE FGI+VEEE+AQ+IATVQDAAD+I+ L+ K
Sbjct: 88 SLDTVEIVMGLEEAFGITVEEENAQTIATVQDAADLIEDLVAKK 131
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 468,571,199
Number of Sequences: 1393205
Number of extensions: 10121298
Number of successful extensions: 29817
Number of sequences better than 10.0: 335
Number of HSP's better than 10.0 without gapping: 27728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29501
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
