Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006671A_C01 KMC006671A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB17995.1| glyoxalase II [Arabidopsis thaliana] 237 7e-62
ref|NP_564636.1| glyoxalase II, putative (hydroxyacylglutathione... 236 2e-61
pir||H96575 probable glyoxalase II, 78941-80643 [imported] - Ara... 236 2e-61
dbj|BAB90501.1| putative glyoxalase II [Oryza sativa (japonica c... 196 2e-49
gb|AAF78432.1|AC018748_11 Contains similarity to an unknown glyo... 188 4e-47
>gb|AAB17995.1| glyoxalase II [Arabidopsis thaliana]
Length = 256
Score = 237 bits (605), Expect = 7e-62
Identities = 108/126 (85%), Positives = 121/126 (95%)
Frame = -3
Query: 585 ATPGHTAGCITYVTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFT 406
ATPGHTAGC+TYVTG+G DQPQPRMAFTGD +LIR CGRTDFQGGSS+QLY+S+HSQIF+
Sbjct: 124 ATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQGGSSDQLYESVHSQIFS 183
Query: 405 LPKDTLIYPAHDYKGFTVSTVGEELQYNPRLTKDEETFKNIMANLNLSYPKMIDVAVPAN 226
LPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK IM+NLNLSYPKMIDVAVPAN
Sbjct: 184 LPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPAN 243
Query: 225 LVCGIQ 208
+VCG+Q
Sbjct: 244 MVCGLQ 249
>ref|NP_564636.1| glyoxalase II, putative (hydroxyacylglutathione hydrolase); protein
id: At1g53580.1, supported by cDNA: gi_15450394,
supported by cDNA: gi_1644426, supported by cDNA:
gi_16648756 [Arabidopsis thaliana]
gi|15450395|gb|AAK96491.1| At1g53580/F22G10.9
[Arabidopsis thaliana] gi|16648757|gb|AAL25570.1|
At1g53580/F22G10.9 [Arabidopsis thaliana]
gi|22655048|gb|AAM98115.1| At1g53580/F22G10.9
[Arabidopsis thaliana]
Length = 256
Score = 236 bits (601), Expect = 2e-61
Identities = 108/126 (85%), Positives = 120/126 (94%)
Frame = -3
Query: 585 ATPGHTAGCITYVTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFT 406
ATPGHTAGC+TYVTG+G DQPQPRMAFTGD +LIR CGRTDFQ GSS+QLY+S+HSQIFT
Sbjct: 124 ATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFT 183
Query: 405 LPKDTLIYPAHDYKGFTVSTVGEELQYNPRLTKDEETFKNIMANLNLSYPKMIDVAVPAN 226
LPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK IM+NLNLSYPKMIDVAVPAN
Sbjct: 184 LPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPAN 243
Query: 225 LVCGIQ 208
+VCG+Q
Sbjct: 244 MVCGLQ 249
>pir||H96575 probable glyoxalase II, 78941-80643 [imported] - Arabidopsis
thaliana gi|12324040|gb|AAG51989.1|AC024260_27
glyoxalase II, putative; 78941-80643 [Arabidopsis
thaliana]
Length = 292
Score = 236 bits (601), Expect = 2e-61
Identities = 108/126 (85%), Positives = 120/126 (94%)
Frame = -3
Query: 585 ATPGHTAGCITYVTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFT 406
ATPGHTAGC+TYVTG+G DQPQPRMAFTGD +LIR CGRTDFQ GSS+QLY+S+HSQIFT
Sbjct: 160 ATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFT 219
Query: 405 LPKDTLIYPAHDYKGFTVSTVGEELQYNPRLTKDEETFKNIMANLNLSYPKMIDVAVPAN 226
LPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK IM+NLNLSYPKMIDVAVPAN
Sbjct: 220 LPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPAN 279
Query: 225 LVCGIQ 208
+VCG+Q
Sbjct: 280 MVCGLQ 285
>dbj|BAB90501.1| putative glyoxalase II [Oryza sativa (japonica cultivar-group)]
Length = 407
Score = 196 bits (497), Expect = 2e-49
Identities = 95/126 (75%), Positives = 103/126 (81%)
Frame = -3
Query: 585 ATPGHTAGCITYVTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFT 406
+TPGHTAGC+TYVTG+G DQP PRMAFTGD LLIRACGRTDFQ IFT
Sbjct: 289 STPGHTAGCVTYVTGEGDDQPSPRMAFTGDALLIRACGRTDFQ--------------IFT 334
Query: 405 LPKDTLIYPAHDYKGFTVSTVGEELQYNPRLTKDEETFKNIMANLNLSYPKMIDVAVPAN 226
LPKDTL+YP HDYKGFTVSTV EE+ YN RLTKD+ETFK IM NLNL+YPKMIDVAVPAN
Sbjct: 335 LPKDTLLYPGHDYKGFTVSTVEEEVAYNARLTKDKETFKKIMDNLNLAYPKMIDVAVPAN 394
Query: 225 LVCGIQ 208
L+CGIQ
Sbjct: 395 LLCGIQ 400
>gb|AAF78432.1|AC018748_11 Contains similarity to an unknown glyoxalase II from Arabidopsis
thaliana gb|U74610 and contains a Metallo-beta-lactamase
PF|00753 domain. ESTs gb|AI999524, gb|AI100252,
gb|AI099807, gb|T44412, gb|T42759, gb|R65540 come from
this gene
Length = 310
Score = 188 bits (478), Expect = 4e-47
Identities = 98/158 (62%), Positives = 107/158 (67%), Gaps = 32/158 (20%)
Frame = -3
Query: 585 ATPGHTAGCITYVTGDGPDQPQPRMAFTGDVLLIRACGRTDFQGGSSEQLYKSIHSQIFT 406
ATPGHTAGC+TYVTG+G DQPQPRMAFTGD +LIR CGRTDFQ IFT
Sbjct: 160 ATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQ--------------IFT 205
Query: 405 LPKDTLIYPAHDYKGFTV--------------------------------STVGEELQYN 322
LPKDTLIYPAHDYKGF V STVGEE+Q+N
Sbjct: 206 LPKDTLIYPAHDYKGFEVMQNANSFTLACLMENMTHPRNGFYIVSVKIQVSTVGEEMQHN 265
Query: 321 PRLTKDEETFKNIMANLNLSYPKMIDVAVPANLVCGIQ 208
PRLTKD+ETFK IM+NLNLSYPKMIDVAVPAN+VCG+Q
Sbjct: 266 PRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQ 303
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,032,855
Number of Sequences: 1393205
Number of extensions: 10212143
Number of successful extensions: 23406
Number of sequences better than 10.0: 275
Number of HSP's better than 10.0 without gapping: 22495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23237
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
