Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006658A_C01 KMC006658A_c01
(659 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566973.1| protein kinase - like; protein id: At3g52890.1,... 231 6e-60
pir||T47546 protein kinase-like - Arabidopsis thaliana gi|752971... 231 6e-60
ref|NP_195984.1| protein kinase -like protein; protein id: At5g0... 228 4e-59
ref|NP_181176.1| putative protein kinase; protein id: At2g36350.... 216 2e-55
gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|202599... 182 5e-45
>ref|NP_566973.1| protein kinase - like; protein id: At3g52890.1, supported by cDNA:
gi_7716429 [Arabidopsis thaliana]
gi|7716430|gb|AAF68383.1|AF236104_1 protein kinase KIPK
[Arabidopsis thaliana]
Length = 744
Score = 231 bits (589), Expect = 6e-60
Identities = 109/143 (76%), Positives = 121/143 (84%), Gaps = 2/143 (1%)
Frame = -3
Query: 657 KGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDL 478
KGEGHGAAVDWWTFGV LYELLYG+TPFKG NN+ETLANVVLQ L+FPDSP VSFQA+DL
Sbjct: 602 KGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDL 661
Query: 477 IRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCEFAFSD--MAPQ 304
IRGLLVKEPENRLG+EKG+ EIK+HPFFEGLNWALIRCAIPPELPDF E+ A
Sbjct: 662 IRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELPDFYEYGGGPEAAADS 721
Query: 303 PQGKGGKYLQCNATGEPVEFELF 235
P G +YL+C A G+ +EFELF
Sbjct: 722 PGGSNNRYLECKAIGDHLEFELF 744
>pir||T47546 protein kinase-like - Arabidopsis thaliana gi|7529713|emb|CAB86893.1|
protein kinase-like [Arabidopsis thaliana]
gi|21703143|gb|AAM74511.1| AT3g52890/F8J2_60 [Arabidopsis
thaliana] gi|25054838|gb|AAN71909.1| putative protein
kinase [Arabidopsis thaliana] gi|25090422|gb|AAN72297.1|
At3g52890/F8J2_60 [Arabidopsis thaliana]
Length = 934
Score = 231 bits (589), Expect = 6e-60
Identities = 109/143 (76%), Positives = 121/143 (84%), Gaps = 2/143 (1%)
Frame = -3
Query: 657 KGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDL 478
KGEGHGAAVDWWTFGV LYELLYG+TPFKG NN+ETLANVVLQ L+FPDSP VSFQA+DL
Sbjct: 792 KGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETLANVVLQNLKFPDSPLVSFQAKDL 851
Query: 477 IRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCEFAFSD--MAPQ 304
IRGLLVKEPENRLG+EKG+ EIK+HPFFEGLNWALIRCAIPPELPDF E+ A
Sbjct: 852 IRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIRCAIPPELPDFYEYGGGPEAAADS 911
Query: 303 PQGKGGKYLQCNATGEPVEFELF 235
P G +YL+C A G+ +EFELF
Sbjct: 912 PGGSNNRYLECKAIGDHLEFELF 934
>ref|NP_195984.1| protein kinase -like protein; protein id: At5g03640.1 [Arabidopsis
thaliana] gi|11358723|pir||T48391 protein kinase-like
protein - Arabidopsis thaliana gi|7340649|emb|CAB82929.1|
protein kinase-like protein [Arabidopsis thaliana]
Length = 926
Score = 228 bits (582), Expect = 4e-59
Identities = 109/141 (77%), Positives = 121/141 (85%)
Frame = -3
Query: 657 KGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDL 478
KGEGHGAAVDWWTFG+FLYELLYG+TPFKG+ NEET+ANVVLQ L+FPD+P VSFQA+DL
Sbjct: 791 KGEGHGAAVDWWTFGIFLYELLYGKTPFKGATNEETIANVVLQSLKFPDNPNVSFQAKDL 850
Query: 477 IRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCEFAFSDMAPQPQ 298
IRGLLVKEPENRLGTEKGAAEIK+H FFEGLNWALIRCAIPPELPDF ++ P +
Sbjct: 851 IRGLLVKEPENRLGTEKGAAEIKRHAFFEGLNWALIRCAIPPELPDFYDYG----VPNQE 906
Query: 297 GKGGKYLQCNATGEPVEFELF 235
GK YL C A GE +EFELF
Sbjct: 907 GK-SNYLDCKAVGEHLEFELF 926
>ref|NP_181176.1| putative protein kinase; protein id: At2g36350.1 [Arabidopsis
thaliana] gi|25287717|pir||F84779 probable protein kinase
[imported] - Arabidopsis thaliana
gi|4510342|gb|AAD21431.1| putative protein kinase
[Arabidopsis thaliana]
Length = 949
Score = 216 bits (550), Expect = 2e-55
Identities = 103/141 (73%), Positives = 121/141 (85%)
Frame = -3
Query: 657 KGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDL 478
KGEGHGAAVDWWTFGV LYELLYG+TPFKG +NEETL+NVV Q L+FPDSP VSFQA++L
Sbjct: 811 KGEGHGAAVDWWTFGVLLYELLYGKTPFKGYDNEETLSNVVYQNLKFPDSPLVSFQAKEL 870
Query: 477 IRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDFCEFAFSDMAPQPQ 298
IR LLVK+PE+RLG+EKGAAEIK+HPFFEGLNWALIRCAIPPELPD + ++ A P+
Sbjct: 871 IRRLLVKDPESRLGSEKGAAEIKRHPFFEGLNWALIRCAIPPELPDIYDNGATE-ATSPE 929
Query: 297 GKGGKYLQCNATGEPVEFELF 235
G +YL+C A G+ +EFELF
Sbjct: 930 G-NNRYLECKAIGDHLEFELF 949
>gb|AAL32579.1| protein kinase 5 [Arabidopsis thaliana] gi|20259910|gb|AAM13302.1|
protein kinase 5 [Arabidopsis thaliana]
Length = 586
Score = 182 bits (461), Expect = 5e-45
Identities = 81/105 (77%), Positives = 94/105 (89%)
Frame = -3
Query: 657 KGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDL 478
KGEGHG+AVDWWTFG+FLYELL+GRTPFKGS N +TL NVV Q LRFP++P VSF ARDL
Sbjct: 440 KGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPLRFPETPVVSFAARDL 499
Query: 477 IRGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELP 343
IRGLL+KEP+ RLG ++GA E+KQHPFFEG+NWALIRCA PPE+P
Sbjct: 500 IRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIP 544
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 560,626,699
Number of Sequences: 1393205
Number of extensions: 11913864
Number of successful extensions: 42205
Number of sequences better than 10.0: 3360
Number of HSP's better than 10.0 without gapping: 38996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40522
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
