Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006233A_C01 KMC006233A_c01
(529 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.19... 154 8e-37
ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; ... 147 8e-35
gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arab... 145 2e-34
ref|NP_175552.1| cinnamyl alcohol dehydrogenase, putative; prote... 145 3e-34
gb|AAD53967.1| aldehyde reductase [Vigna radiata] 141 4e-33
>pir||T16995 probable cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) - apple tree
gi|2981475|gb|AAC06319.1| putative cinnamyl alcohol
dehydrogenase [Malus x domestica]
Length = 325
Score = 154 bits (388), Expect = 8e-37
Identities = 69/106 (65%), Positives = 89/106 (83%)
Frame = -2
Query: 453 FPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDLYPTIQISNRC 274
FPN+S GW++VKDVA AHIQA+E +ASGRYCLVERV H+SE+ RIL +LYPT+Q+ +C
Sbjct: 220 FPNASFGWINVKDVANAHIQAFERPTASGRYCLVERVAHFSEVVRILRELYPTLQLPEKC 279
Query: 273 EDNGPYVPTYQYSQEKAQSLGIEFTPLEISIKGTVESFREKKIVNF 136
D+ P+VPTYQ S+EKA+SLG+EF PL++S+K TVES +EK VNF
Sbjct: 280 ADDKPFVPTYQVSKEKAKSLGVEFIPLDVSLKETVESLKEKGFVNF 325
>ref|NP_197445.1| cinnamyl-alcohol dehydrogenase - like protein; protein id:
At5g19440.1, supported by cDNA: 6748. [Arabidopsis
thaliana]
Length = 326
Score = 147 bits (371), Expect = 8e-35
Identities = 67/116 (57%), Positives = 87/116 (74%)
Frame = -2
Query: 483 LFELLDXGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDL 304
+ L++ FPN S GWV+VKDVA AHIQA+E+ SA+GRYCLVERVVH+SE+ IL +L
Sbjct: 211 ILNLINGAKTFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILREL 270
Query: 303 YPTIQISNRCEDNGPYVPTYQYSQEKAQSLGIEFTPLEISIKGTVESFREKKIVNF 136
YP + + RC D PYVPTYQ S++K +SLGI++ PL++SIK TVES +EK F
Sbjct: 271 YPNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGFAQF 326
>gb|AAM65984.1| cinnamyl-alcohol dehydrogenase-like protein [Arabidopsis thaliana]
Length = 326
Score = 145 bits (367), Expect = 2e-34
Identities = 66/116 (56%), Positives = 86/116 (73%)
Frame = -2
Query: 483 LFELLDXGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDL 304
+ L++ FPN S GWV+VKDVA AHIQ +E+ SA+GRYCLVERVVH+SE+ IL +L
Sbjct: 211 ILNLINGAKTFPNLSFGWVNVKDVANAHIQTFEVPSANGRYCLVERVVHHSEIVNILREL 270
Query: 303 YPTIQISNRCEDNGPYVPTYQYSQEKAQSLGIEFTPLEISIKGTVESFREKKIVNF 136
YP + + RC D PYVPTYQ S++K +SLGI++ PL++SIK TVES +EK F
Sbjct: 271 YPNLPLPERCVDENPYVPTYQVSKDKTRSLGIDYIPLKVSIKETVESLKEKGFAQF 326
>ref|NP_175552.1| cinnamyl alcohol dehydrogenase, putative; protein id: At1g51410.1
[Arabidopsis thaliana] gi|25405464|pir||C96552
hypothetical protein F5D21.12 [imported] - Arabidopsis
thaliana gi|12325359|gb|AAG52618.1|AC024261_5 cinnamyl
alcohol dehydrogenase, putative; 82967-79323 [Arabidopsis
thaliana]
Length = 809
Score = 145 bits (366), Expect = 3e-34
Identities = 67/116 (57%), Positives = 84/116 (71%)
Frame = -2
Query: 483 LFELLDXGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDL 304
+ L+ FPN++ GWV+VKDVA AHIQA+E A GRYCLVERV HYSE+ IL DL
Sbjct: 694 VLSLIKGAQTFPNATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDL 753
Query: 303 YPTIQISNRCEDNGPYVPTYQYSQEKAQSLGIEFTPLEISIKGTVESFREKKIVNF 136
YP Q+ +C D Y+PTY+ S+EKA+SLG+EF PLE+SIK TVES R+K + F
Sbjct: 754 YPDFQLPEKCADEKIYIPTYKVSKEKAESLGVEFVPLEVSIKETVESLRDKGFIRF 809
>gb|AAD53967.1| aldehyde reductase [Vigna radiata]
Length = 325
Score = 141 bits (356), Expect = 4e-33
Identities = 67/111 (60%), Positives = 88/111 (78%)
Frame = -2
Query: 474 LLDXGVPFPNSSMGWVDVKDVAKAHIQAYEIASASGRYCLVERVVHYSELARILGDLYPT 295
L++ F N+S+GWVDVKDVA AHI AYE ASA+GRY LVERV H+ + A+IL DLYPT
Sbjct: 213 LVNGAKTFKNASLGWVDVKDVALAHILAYENASANGRYLLVERVAHFGDAAKILRDLYPT 272
Query: 294 IQISNRCEDNGPYVPTYQYSQEKAQSLGIEFTPLEISIKGTVESFREKKIV 142
+QI ++CED+ P P +Q S+EKA+SLGI++ PLE+S+K TVES +EKK +
Sbjct: 273 LQIPDKCEDDKPLEPIFQVSKEKAKSLGIDYIPLEVSLKDTVESLKEKKFL 323
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,409,376
Number of Sequences: 1393205
Number of extensions: 8677922
Number of successful extensions: 17144
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 16810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17113
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
