>KMC006196A_C01 KMC006196A_c01
ccagtgtaaaaaagttttacactatcATCAAATCATATTTTAAACATGACGCATTATCAT
TTCAATTTTCAAAGTATTTTAATTAAATAACCACTTTGGGCACGTCTCTGAAAAATGATT
GGCTGACTTTTAAACTGTCAGCACATATACATTATTCTGATACACACACACATATATACC
CTCGTGAGCACTACGTGAAAGTCGAAACATACATGTACGATACATTCAAGCACTCTTGCA
ACTCATCCAATTTGATTTCAAGTGAAGTATGAAGTAACAATCGTCAAATCTTCAGCATGC
AACATCCAACTATTTTGGGTGTAATCCTATGGCAATAAGTGTGTCCACCCAATGCTTTAA
AATGTGGACGTTGAAAACAACAACCAGGATTAGCCTCAGTATCTACCTAATTAAGTGATC
CACGGCACTTTTGGGAACCACAGTTGCAGGGAATCTTTTTCTCCTCCAAGGGAAACTTAT
AATnGTATGTAATTTCTTCTCCAGAAGCTATATGncgnttngcatataaaaaaatcttct
t

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC006196A_C01 KMC006196A_c01
         (541 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_037523.6| similar to KIAA1076 protein [Homo sapiens]            67  1e-10
ref|XP_132323.1| similar to CG17396 gene product [Drosophila mel...    67  1e-10
gb|AAH40775.1| Unknown (protein for IMAGE:4949423) [Mus musculus]      67  1e-10
gb|AAH41681.1| Similar to hypothetical protein LOC233904 [Mus mu...    67  1e-10
ref|NP_808249.1| hypothetical protein LOC208043 [Mus musculus] g...    67  1e-10

>ref|XP_037523.6| similar to KIAA1076 protein [Homo sapiens]
          Length = 772

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 28/44 (63%), Positives = 35/44 (78%)
 Frame = -1

Query: 541 KKIFLYAXRHIASGEEITYXYKFPLEEKKIPCNCGSQKCRGSLN 410
           KKI +Y+ +HI   EEITY YKFP+E+ KIPC CGS+ CRG+LN
Sbjct: 729 KKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 772

>ref|XP_132323.1| similar to CG17396 gene product [Drosophila melanogaster] [Mus
           musculus]
          Length = 191

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 28/44 (63%), Positives = 35/44 (78%)
 Frame = -1

Query: 541 KKIFLYAXRHIASGEEITYXYKFPLEEKKIPCNCGSQKCRGSLN 410
           KKI +Y+ +HI   EEITY YKFP+E+ KIPC CGS+ CRG+LN
Sbjct: 148 KKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 191

>gb|AAH40775.1| Unknown (protein for IMAGE:4949423) [Mus musculus]
          Length = 911

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 28/44 (63%), Positives = 35/44 (78%)
 Frame = -1

Query: 541 KKIFLYAXRHIASGEEITYXYKFPLEEKKIPCNCGSQKCRGSLN 410
           KKI +Y+ +HI   EEITY YKFP+E+ KIPC CGS+ CRG+LN
Sbjct: 868 KKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 911

>gb|AAH41681.1| Similar to hypothetical protein LOC233904 [Mus musculus]
          Length = 917

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 28/44 (63%), Positives = 35/44 (78%)
 Frame = -1

Query: 541  KKIFLYAXRHIASGEEITYXYKFPLEEKKIPCNCGSQKCRGSLN 410
            KKI +Y+ +HI   EEITY YKFP+E+ KIPC CGS+ CRG+LN
Sbjct: 874  KKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 917

>ref|NP_808249.1| hypothetical protein LOC208043 [Mus musculus]
            gi|23468263|gb|AAH38367.1| Unknown (protein for
            MGC:39035) [Mus musculus]
          Length = 1092

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 28/44 (63%), Positives = 35/44 (78%)
 Frame = -1

Query: 541  KKIFLYAXRHIASGEEITYXYKFPLEEKKIPCNCGSQKCRGSLN 410
            KKI +Y+ +HI   EEITY YKFP+E+ KIPC CGS+ CRG+LN
Sbjct: 1049 KKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN 1092

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 447,203,407
Number of Sequences: 1393205
Number of extensions: 9135570
Number of successful extensions: 16997
Number of sequences better than 10.0: 194
Number of HSP's better than 10.0 without gapping: 16374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16873
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL060c01_f BP055734 1 466 2 GENLf037h10 BP064309 21 541

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