Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006156A_C01 KMC006156A_c01
(544 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565685.1| expressed protein; protein id: At2g29670.1, sup... 137 1e-31
dbj|BAC43604.1| unknown protein [Arabidopsis thaliana] 137 1e-31
gb|AAF79562.1|AC022464_20 F22G5.38 [Arabidopsis thaliana] 132 3e-30
gb|AAL57695.1| At1g07280/F22G5_32 [Arabidopsis thaliana] gi|2213... 132 4e-30
ref|NP_172208.1| unknown protein; protein id: At1g07280.1 [Arabi... 132 4e-30
>ref|NP_565685.1| expressed protein; protein id: At2g29670.1, supported by cDNA:
gi_14030738, supported by cDNA: gi_20465642 [Arabidopsis
thaliana] gi|14030739|gb|AAK53044.1|AF375460_1
At2g29670/T27A16.23 [Arabidopsis thaliana]
gi|18377765|gb|AAL67032.1| unknown protein [Arabidopsis
thaliana] gi|20197389|gb|AAC35237.2| expressed protein
[Arabidopsis thaliana] gi|20465643|gb|AAM20290.1|
unknown protein [Arabidopsis thaliana]
gi|23308477|gb|AAN18208.1| At2g29670/T27A16.23
[Arabidopsis thaliana]
Length = 536
Score = 137 bits (344), Expect = 1e-31
Identities = 59/75 (78%), Positives = 68/75 (90%)
Frame = -2
Query: 513 RXEEYFKRAIEVEPPDAEAYSKYATFLWKVKNDLWGAEETYLEAISAEPNNTYYAANYAH 334
R EEYFKRA+ VEP DAEA+SKYATFLW+ ++DLW AEET+LEAI A+P N+YYAANYA+
Sbjct: 454 RAEEYFKRAVGVEPKDAEAFSKYATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYAN 513
Query: 333 FLWNTGGDDTCFPLD 289
FLWNTGGDDTCFPLD
Sbjct: 514 FLWNTGGDDTCFPLD 528
>dbj|BAC43604.1| unknown protein [Arabidopsis thaliana]
Length = 536
Score = 137 bits (344), Expect = 1e-31
Identities = 59/75 (78%), Positives = 68/75 (90%)
Frame = -2
Query: 513 RXEEYFKRAIEVEPPDAEAYSKYATFLWKVKNDLWGAEETYLEAISAEPNNTYYAANYAH 334
R EEYFKRA+ VEP DAEA+SKYATFLW+ ++DLW AEET+LEAI A+P N+YYAANYA+
Sbjct: 454 RAEEYFKRAVGVEPKDAEAFSKYATFLWRARDDLWAAEETFLEAIDADPTNSYYAANYAN 513
Query: 333 FLWNTGGDDTCFPLD 289
FLWNTGGDDTCFPLD
Sbjct: 514 FLWNTGGDDTCFPLD 528
>gb|AAF79562.1|AC022464_20 F22G5.38 [Arabidopsis thaliana]
Length = 377
Score = 132 bits (332), Expect = 3e-30
Identities = 57/79 (72%), Positives = 68/79 (85%)
Frame = -2
Query: 516 SRXEEYFKRAIEVEPPDAEAYSKYATFLWKVKNDLWGAEETYLEAISAEPNNTYYAANYA 337
+R E+YFKRA + EP DAEA +KYATFLW+ +ND+W AEETYLEAISA+P N+ Y+ANYA
Sbjct: 293 NRAEKYFKRAAKAEPADAEALNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYA 352
Query: 336 HFLWNTGGDDTCFPLDLSS 280
HFLWNTGGD+TCFPLD S
Sbjct: 353 HFLWNTGGDETCFPLDAPS 371
>gb|AAL57695.1| At1g07280/F22G5_32 [Arabidopsis thaliana]
gi|22137118|gb|AAM91404.1| At1g07280/F22G5_32
[Arabidopsis thaliana]
Length = 552
Score = 132 bits (331), Expect = 4e-30
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = -2
Query: 513 RXEEYFKRAIEVEPPDAEAYSKYATFLWKVKNDLWGAEETYLEAISAEPNNTYYAANYAH 334
R E+YFKRA + EP DAEA +KYATFLW+ +ND+W AEETYLEAISA+P N+ Y+ANYAH
Sbjct: 469 RAEKYFKRAAKAEPADAEALNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYAH 528
Query: 333 FLWNTGGDDTCFPLDLSS 280
FLWNTGGD+TCFPLD S
Sbjct: 529 FLWNTGGDETCFPLDAPS 546
>ref|NP_172208.1| unknown protein; protein id: At1g07280.1 [Arabidopsis thaliana]
Length = 302
Score = 132 bits (331), Expect = 4e-30
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = -2
Query: 513 RXEEYFKRAIEVEPPDAEAYSKYATFLWKVKNDLWGAEETYLEAISAEPNNTYYAANYAH 334
R E+YFKRA + EP DAEA +KYATFLW+ +ND+W AEETYLEAISA+P N+ Y+ANYAH
Sbjct: 219 RAEKYFKRAAKAEPADAEALNKYATFLWRARNDIWRAEETYLEAISADPTNSVYSANYAH 278
Query: 333 FLWNTGGDDTCFPLDLSS 280
FLWNTGGD+TCFPLD S
Sbjct: 279 FLWNTGGDETCFPLDAPS 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,130,479
Number of Sequences: 1393205
Number of extensions: 11831493
Number of successful extensions: 48756
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 37682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47849
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
