Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC006054A_C01 KMC006054A_c01
(756 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_704685.1| hypothetical protein [Plasmodium falciparum 3D7... 37 0.31
ref|XP_287708.1| hypothetical protein XP_287708 [Mus musculus] 35 0.89
gb|AAD50121.1|AF153362_1 adenylyl cyclase [Dictyostelium discoid... 35 1.5
pir||S31574 hypothetical protein 2 - Mediterranean fruit fly gi|... 35 1.5
gb|AAO52221.1| hypothetical protein [Dictyostelium discoideum] 34 2.0
>ref|NP_704685.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23505045|emb|CAD51828.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1728
Score = 37.0 bits (84), Expect = 0.31
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = -2
Query: 224 SSTNMQLKNTYSDKTEPNKTLQQAKESKE*IDDADSNTTQARKIVSEQRTF*KGGCWAIQ 45
++TN+ +KNT+++K + + L +K+S D D+N TQ+ + S TF
Sbjct: 611 NNTNLNIKNTFNNKKKNTQNLLLSKKS---FSDVDNNKTQSSSLNSSSSTFLSNELCLSD 667
Query: 44 FPKKNRNR 21
F N N+
Sbjct: 668 FTHMNTNK 675
>ref|XP_287708.1| hypothetical protein XP_287708 [Mus musculus]
Length = 137
Score = 35.4 bits (80), Expect = 0.89
Identities = 21/85 (24%), Positives = 39/85 (45%)
Frame = -3
Query: 286 QAKHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQTQH 107
Q + QQ Q+QQ Q+ + QQ + + Q + +Q+ Q+ + Q Q
Sbjct: 39 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCQQCQQCQQLQQQEQQQQQQQQQQQQQQ 98
Query: 106 KQEKLCRNNELSRRGGAGRSNSQKK 32
+Q++ RNN SRR + + + +
Sbjct: 99 QQQRRRRNNRRSRRSRKSKKSRRNR 123
>gb|AAD50121.1|AF153362_1 adenylyl cyclase [Dictyostelium discoideum]
Length = 2123
Score = 34.7 bits (78), Expect = 1.5
Identities = 20/66 (30%), Positives = 35/66 (52%)
Frame = -3
Query: 292 SLQAKHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQT 113
S Q++++QQPQ+QQ Q+ + QQ + +Q Q + Q+ Q+ + Q
Sbjct: 1909 SQQSQYVQQPQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQQQQQQPQQQQQ----LQQQQ 1964
Query: 112 QHKQEK 95
QH+Q+K
Sbjct: 1965 QHQQQK 1970
Score = 32.3 bits (72), Expect = 7.5
Identities = 17/64 (26%), Positives = 32/64 (49%)
Frame = -3
Query: 286 QAKHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQTQH 107
Q + QQPQ+QQ Q++ + HQ + +Q Q + +Q+ Q+ + Q Q
Sbjct: 1976 QQQQPQQPQQQQQQQIQNQYQHQLQYQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 2035
Query: 106 KQEK 95
+Q++
Sbjct: 2036 QQQQ 2039
Score = 32.3 bits (72), Expect = 7.5
Identities = 19/64 (29%), Positives = 32/64 (49%)
Frame = -3
Query: 286 QAKHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQTQH 107
Q+++IQQPQ QQSQ + QQ + +Q Q + +Q+ Q+ + Q Q
Sbjct: 1900 QSQNIQQPQSQQSQYVQQPQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQQQQQQPQQQQQ 1959
Query: 106 KQEK 95
Q++
Sbjct: 1960 LQQQ 1963
>pir||S31574 hypothetical protein 2 - Mediterranean fruit fly
gi|5977|emb|CAA49660.1| unknown [Ceratitis capitata]
Length = 356
Score = 34.7 bits (78), Expect = 1.5
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = -3
Query: 280 KHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQTQHKQ 101
+H+QQ Q+QQ Q+ +Q Q + +Q+ Q+ + Q QH +
Sbjct: 141 QHMQQQQQQQQQQ-------------------QQQQQQQQQQQQQQQQQ-----QQQHTK 176
Query: 100 EKL--------CRNNELSRRGGAGRSNSQ 38
EKL C+ E S + GAG SN Q
Sbjct: 177 EKLKSERKMSVCKKEESSSKRGAGNSNGQ 205
>gb|AAO52221.1| hypothetical protein [Dictyostelium discoideum]
Length = 1003
Score = 34.3 bits (77), Expect = 2.0
Identities = 24/81 (29%), Positives = 36/81 (43%)
Frame = -3
Query: 286 QAKHIQQPQEQQSQRLTFKLDHQQTCSSKTLTVTKQNQTRHCNKQKNQKSR*MMLIQTQH 107
Q K QQ Q+QQ + LTF LD QQ + + Q + +Q+ Q+ + Q Q
Sbjct: 134 QQKQQQQQQQQQPKTLTFSLDSQQQQQQQPQLQSPQLIDQQQQQQQQQQQQQQQQQQQQQ 193
Query: 106 KQEKLCRNNELSRRGGAGRSN 44
+ R + +S R G N
Sbjct: 194 QIPYHQRKHHISIRDGDDNDN 214
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 612,947,748
Number of Sequences: 1393205
Number of extensions: 12467650
Number of successful extensions: 30154
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 27266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29826
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36877108757
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
