Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005962A_C01 KMC005962A_c01
(597 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90379.1| ankyrin-like protein [Oryza sativa (japonica cul... 173 2e-42
ref|NP_201208.1| ankyrin-like protein; protein id: At5g64030.1 [... 170 1e-41
gb|AAM78114.1| AT5g64030/MBM17_13 [Arabidopsis thaliana] gi|2776... 170 1e-41
ref|NP_174240.1| unknown protein; protein id: At1g29470.1 [Arabi... 154 1e-36
ref|NP_180977.1| unknown protein; protein id: At2g34300.1 [Arabi... 149 3e-35
>dbj|BAB90379.1| ankyrin-like protein [Oryza sativa (japonica cultivar-group)]
Length = 806
Score = 173 bits (438), Expect = 2e-42
Identities = 79/98 (80%), Positives = 87/98 (88%)
Frame = -1
Query: 597 YHDWCESFSTYPRSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLIVRDSVEIIN 418
YHDWCESFSTYPR+YDLLH DHLFSKLKKRC+ V AEVDR+LRPEGKLIVRD+ E IN
Sbjct: 706 YHDWCESFSTYPRTYDLLHADHLFSKLKKRCKLLPVFAEVDRILRPEGKLIVRDNAETIN 765
Query: 417 ELQSLVKSMQWEVRMTYSKENVGFLCVQKSMWRPKELE 304
ELQ +VKS+QWEVRMTY+K N G LCVQKSMWRPKE+E
Sbjct: 766 ELQGMVKSLQWEVRMTYTKGNEGLLCVQKSMWRPKEIE 803
Score = 33.1 bits (74), Expect = 2.8
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Frame = -1
Query: 567 YP-RSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLI---------VRDSVEIIN 418
YP R +D++H ++ + ++ E++R+LRP G + + + VEI N
Sbjct: 463 YPSRVFDVIHCARC--RVPWHIEGGMLLLELNRLLRPGGYFVWSATPVYQKLPEDVEIWN 520
Query: 417 ELQSLVKSMQWE-VRMTYSKEN-VGFLCVQKSM 325
+ SL K+M W+ V T K N VG QK M
Sbjct: 521 AMSSLTKAMCWKMVNKTKDKLNQVGMAIYQKPM 553
>ref|NP_201208.1| ankyrin-like protein; protein id: At5g64030.1 [Arabidopsis
thaliana]
Length = 786
Score = 170 bits (430), Expect = 1e-41
Identities = 77/103 (74%), Positives = 88/103 (84%)
Frame = -1
Query: 597 YHDWCESFSTYPRSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLIVRDSVEIIN 418
YHDWCESFSTYPRSYDLLH DHLFSKLK+RC AV+AEVDR+LRPEGKLIVRD E I
Sbjct: 682 YHDWCESFSTYPRSYDLLHADHLFSKLKQRCNLTAVIAEVDRVLRPEGKLIVRDDAETIQ 741
Query: 417 ELQSLVKSMQWEVRMTYSKENVGFLCVQKSMWRPKELETLEYA 289
+++ +VK+M+WEVRMTYSKE G L VQKS+WRP E+ETL YA
Sbjct: 742 QVEGMVKAMKWEVRMTYSKEKEGLLSVQKSIWRPSEVETLTYA 784
>gb|AAM78114.1| AT5g64030/MBM17_13 [Arabidopsis thaliana] gi|27764914|gb|AAO23578.1|
At5g64030/MBM17_13 [Arabidopsis thaliana]
Length = 829
Score = 170 bits (430), Expect = 1e-41
Identities = 77/103 (74%), Positives = 88/103 (84%)
Frame = -1
Query: 597 YHDWCESFSTYPRSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLIVRDSVEIIN 418
YHDWCESFSTYPRSYDLLH DHLFSKLK+RC AV+AEVDR+LRPEGKLIVRD E I
Sbjct: 725 YHDWCESFSTYPRSYDLLHADHLFSKLKQRCNLTAVIAEVDRVLRPEGKLIVRDDAETIQ 784
Query: 417 ELQSLVKSMQWEVRMTYSKENVGFLCVQKSMWRPKELETLEYA 289
+++ +VK+M+WEVRMTYSKE G L VQKS+WRP E+ETL YA
Sbjct: 785 QVEGMVKAMKWEVRMTYSKEKEGLLSVQKSIWRPSEVETLTYA 827
>ref|NP_174240.1| unknown protein; protein id: At1g29470.1 [Arabidopsis thaliana]
gi|25403070|pir||E86417 unknown protein, 55790-52851
[imported] - Arabidopsis thaliana
gi|12323540|gb|AAG51752.1|AC068667_31 unknown protein;
55790-52851 [Arabidopsis thaliana]
Length = 768
Score = 154 bits (388), Expect = 1e-36
Identities = 69/103 (66%), Positives = 82/103 (78%)
Frame = -1
Query: 597 YHDWCESFSTYPRSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLIVRDSVEIIN 418
YHDWCESFSTYPR+YDLLH DHLFS LKKRC V+AEVDR+LRP+G IVRD +E I
Sbjct: 664 YHDWCESFSTYPRTYDLLHADHLFSSLKKRCNLVGVMAEVDRILRPQGTFIVRDDMETIG 723
Query: 417 ELQSLVKSMQWEVRMTYSKENVGFLCVQKSMWRPKELETLEYA 289
E++ +VKSM+W VRMT+SK+ G L VQKS WRP E ET++ A
Sbjct: 724 EIEKMVKSMKWNVRMTHSKDGEGLLSVQKSWWRPTEAETIQSA 766
>ref|NP_180977.1| unknown protein; protein id: At2g34300.1 [Arabidopsis thaliana]
gi|7485462|pir||T02318 hypothetical protein At2g34300
[imported] - Arabidopsis thaliana
gi|3337361|gb|AAC27406.1| unknown protein [Arabidopsis
thaliana]
Length = 770
Score = 149 bits (375), Expect = 3e-35
Identities = 62/103 (60%), Positives = 85/103 (82%)
Frame = -1
Query: 597 YHDWCESFSTYPRSYDLLHXDHLFSKLKKRCQFEAVVAEVDRMLRPEGKLIVRDSVEIIN 418
YHDWCESF+TYPR+YDLLH DHLFS L+KRC +V+AE+DR+LRP+G I+RD +E +
Sbjct: 666 YHDWCESFNTYPRTYDLLHADHLFSTLRKRCNLVSVMAEIDRILRPQGTFIIRDDMETLG 725
Query: 417 ELQSLVKSMQWEVRMTYSKENVGFLCVQKSMWRPKELETLEYA 289
E++ +VKSM+W+V+MT SK+N G L ++KS WRP+E ET++ A
Sbjct: 726 EVEKMVKSMKWKVKMTQSKDNEGLLSIEKSWWRPEETETIKSA 768
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,426,719
Number of Sequences: 1393205
Number of extensions: 11172597
Number of successful extensions: 20681
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 20179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20645
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
