>KMC005954A_C01 KMC005954A_c01
ccttagaaactagaaccaccaatgaactatagctccatctaaataggcacacaagagcta
gctatagagacacaacacaaCCTCTTTCTGCCACTCGTGCTTCTGTTGTTTCCCTCATCA
CACCCCACAAACCATCTCCATCCTTTTAAATAACATCCAACTTCCACACACCATGACCTG
CACTTTTCAGCATTTGCAATGACACAATTGCCCATCACCCTCACCCCTAAGCAACAAAGC
AAGGACACCACAACACCAAACCTTACAAAGAACACCAAAAGGTCATTATAGTCATTCACA
TGCTATAGTCCAACTCTGTGTACTGTATCAACTGTAATCTAAGGATAAGCATAGATCTGC
AGAACCACCCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTGTGATATCATGAGATTC
TTTGTTATATACTAGATTCTGAACTCTCAGTTGnCGGAATATTCCTTTCTGnTTCACCGG
AGACATGGGTTTTCACTGAAAACGGAAATGGGTGGTGAGGACTTCGCCGGAGAATCCAGA
ACGGCGGCGGAGCTACCTACGGGAGCTTCAATCCTCCGGCGAGCTGTGGTACTCATCTGT
TCCGTCCTCTCTCTCTCACACTCGATCAGGGTCTTCGCCGGAAAATGGCAAGTCATCCGG
AGCAAGCTGGAGGAGCTTCAATCCGGTCTAATCGCCGCCGAGAATTGCGATTCCGGTGAG
AATCCTTCTCTTTCCCGGTTGGTTCCTTCCATTGTGGCCACCGTTTTGGAGTGCCACGAT
CTGGGTCAGCGTTGCATCGATGTTTCATACAGTGGGAAGCTTCTGATGCAGAGTGATTTG
GACGTGGCGTTCGCGAAGCTCGATGGGTTGACGAAGAAGCTCGCGGAGATTTACAGGACG
GGGATTTTGACAAATGGGTATGCGCTCGTTGTGTCGAAACCGTGTCTTGGAGCTTCCAAA
GAGGACATGAGATTCTACGTGAGGGACTTGTTGACGAGGATGAAGATnggggatntgggt
atgaagaaacaggctt

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005954A_C01 KMC005954A_c01
         (1036 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_564774.1| expressed protein; protein id: At1g61350.1, sup...   173  3e-42
gb|AAL14389.1| At1g61350/T1F9_16 [Arabidopsis thaliana]               173  3e-42
ref|NP_178638.1| hypothetical protein; protein id: At2g05810.1, ...   102  7e-21
gb|AAM92297.1| putative arm repeat containing protein [Oryza sat...    79  1e-13
ref|NP_182096.1| unknown protein; protein id: At2g45720.1 [Arabi...    71  2e-11

>ref|NP_564774.1| expressed protein; protein id: At1g61350.1, supported by cDNA:
            gi_16209657, supported by cDNA: gi_18700124 [Arabidopsis
            thaliana] gi|25404883|pir||B96639 protein T1F9.16
            [imported] - Arabidopsis thaliana
            gi|3056595|gb|AAC13906.1|AAC13906 T1F9.16 [Arabidopsis
            thaliana] gi|18700125|gb|AAL77674.1| At1g61350/T1F9_16
            [Arabidopsis thaliana]
          Length = 573

 Score =  173 bits (439), Expect = 3e-42
 Identities = 92/164 (56%), Positives = 122/164 (74%)
 Frame = +1

Query: 544  AAELPTGASILRRAVVLICSVLSLSHSIRVFAGKWQVIRSKLEELQSGLIAAENCDSGEN 723
            A E  + ASI  +A+  I S++SLSHSI+ F  KWQ+IR+KL+EL SGL +  N +SG +
Sbjct: 5    ACEESSKASI-EKAIEAISSLISLSHSIKSFNIKWQLIRTKLQELYSGLDSLRNLNSGFD 63

Query: 724  PSLSRLVPSIVATVLECHDLGQRCIDVSYSGKLLMQSDLDVAFAKLDGLTKKLAEIYRTG 903
            PSLS L+ +I+ ++ + +DL  RC++VS+SGKLLMQSDLDV   K DG T+ L+ IY  G
Sbjct: 64   PSLSSLISAILISLKDTYDLATRCVNVSFSGKLLMQSDLDVMAGKFDGHTRNLSRIYSAG 123

Query: 904  ILTNGYALVVSKPCLGASKEDMRFYVRDLLTRMKXGDXGMKKQA 1035
            IL++G+A+VV KP   A K+DMRFY+RDLLTRMK GD  MKKQA
Sbjct: 124  ILSHGFAIVVLKPNGNACKDDMRFYIRDLLTRMKIGDLEMKKQA 167

>gb|AAL14389.1| At1g61350/T1F9_16 [Arabidopsis thaliana]
          Length = 573

 Score =  173 bits (439), Expect = 3e-42
 Identities = 92/164 (56%), Positives = 122/164 (74%)
 Frame = +1

Query: 544  AAELPTGASILRRAVVLICSVLSLSHSIRVFAGKWQVIRSKLEELQSGLIAAENCDSGEN 723
            A E  + ASI  +A+  I S++SLSHSI+ F  KWQ+IR+KL+EL SGL +  N +SG +
Sbjct: 5    ACEESSKASI-EKAIEAISSLISLSHSIKSFNIKWQLIRTKLQELYSGLDSLRNLNSGFD 63

Query: 724  PSLSRLVPSIVATVLECHDLGQRCIDVSYSGKLLMQSDLDVAFAKLDGLTKKLAEIYRTG 903
            PSLS L+ +I+ ++ + +DL  RC++VS+SGKLLMQSDLDV   K DG T+ L+ IY  G
Sbjct: 64   PSLSSLISAILISLKDTYDLATRCVNVSFSGKLLMQSDLDVMAGKFDGHTRNLSRIYSAG 123

Query: 904  ILTNGYALVVSKPCLGASKEDMRFYVRDLLTRMKXGDXGMKKQA 1035
            IL++G+A+VV KP   A K+DMRFY+RDLLTRMK GD  MKKQA
Sbjct: 124  ILSHGFAIVVLKPNGNACKDDMRFYIRDLLTRMKIGDLEMKKQA 167

>ref|NP_178638.1| hypothetical protein; protein id: At2g05810.1, supported by cDNA:
            gi_20466607 [Arabidopsis thaliana]
            gi|25411189|pir||F84471 hypothetical protein At2g05810
            [imported] - Arabidopsis thaliana
            gi|20197848|gb|AAM15279.1| hypothetical protein
            [Arabidopsis thaliana] gi|20466608|gb|AAM20621.1| unknown
            protein [Arabidopsis thaliana]
          Length = 580

 Score =  102 bits (255), Expect = 7e-21
 Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
 Frame = +1

Query: 574  LRRAVVLICSVLSL----SHSIRVFAGKWQVIRSKLEELQSGLIA-AENCDSGENPSLSR 738
            L+  V LI +VLSL    S ++R F G+WQ++RSKL  L S L + +E+    +NP L  
Sbjct: 20   LQPLVDLITNVLSLLLLSSLTVRSFIGRWQILRSKLFTLNSSLSSLSESPHWSQNPLLHT 79

Query: 739  LVPSIVATVLECHDLGQRCIDVSYSG-KLLMQSDLDVAFAKLDGLTKKLAEIYRTGILTN 915
            L+PS+++ +     L  +C   S+SG KLLMQSDLD+A + L      L  + R+G+L  
Sbjct: 80   LLPSLLSNLQRLSSLSDQCSSASFSGGKLLMQSDLDIASSSLSTHISDLDLLLRSGVLHQ 139

Query: 916  GYALVVSKPCLGASKEDMRFYVRDLLTRMKXGDXGMKKQA 1035
              A+V+S P   + K+D+ F++RDL TR++ G    KK++
Sbjct: 140  QNAIVLSLPPPTSDKDDIAFFIRDLFTRLQIGGAEFKKKS 179

>gb|AAM92297.1| putative arm repeat containing protein [Oryza sativa (japonica
            cultivar-group)] gi|27311271|gb|AAO00697.1| putative
            armadillo repeat containing protein [Oryza sativa
            (japonica cultivar-group)]
          Length = 575

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 53/161 (32%), Positives = 86/161 (52%), Gaps = 2/161 (1%)
 Frame = +1

Query: 559  TGASILRRAVVLICSVLSLSHSIRVFAGKWQVIRSKLEELQSGL--IAAENCDSGENPSL 732
            T   +L RA  L+ + L  + +   F G+W+VI ++LE +   L  +++  C S +N   
Sbjct: 33   TAEELLERARSLVPAALDAARAATGFGGRWKVIAARLERVPPCLSDLSSHPCFS-KNSLC 91

Query: 733  SRLVPSIVATVLECHDLGQRCIDVSYSGKLLMQSDLDVAFAKLDGLTKKLAEIYRTGILT 912
              L+ S+ AT+ E  +LG RC +   +GKL MQSDLD    KLD   +  A + +TG+L+
Sbjct: 92   RELLQSVAATLAEAAELGARCREPPRAGKLQMQSDLDALAGKLDLNLRDCALLIKTGVLS 151

Query: 913  NGYALVVSKPCLGASKEDMRFYVRDLLTRMKXGDXGMKKQA 1035
            +     V+     A++ D    VR+LL R++ G    K +A
Sbjct: 152  DATVPPVAPAAEAAAQTD----VRELLARLQIGHAEAKHRA 188

>ref|NP_182096.1| unknown protein; protein id: At2g45720.1 [Arabidopsis thaliana]
            gi|7485635|pir||T02475 hypothetical protein At2g45720
            [imported] - Arabidopsis thaliana
            gi|3386623|gb|AAC28553.1| unknown protein [Arabidopsis
            thaliana] gi|20197052|gb|AAM14897.1| unknown protein
            [Arabidopsis thaliana]
          Length = 553

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 49/161 (30%), Positives = 87/161 (53%), Gaps = 2/161 (1%)
 Frame = +1

Query: 559  TGASILRRAVVLICSVLSLSHSIRVFAGKWQVIRSKLEELQSGL--IAAENCDSGENPSL 732
            T   +L +A  L+   LS + +++ F+ +W+VI S+LE++ + L  +++  C S      
Sbjct: 15   TVEDLLLQAQELVPIALSKARTVKGFSSRWRVIISRLEKIPTCLSDLSSHPCFSKHTLCK 74

Query: 733  SRLVPSIVATVLECHDLGQRCIDVSYSGKLLMQSDLDVAFAKLDGLTKKLAEIYRTGILT 912
             +L  +++ T+ E  +L   C+     GKL MQSDLD   AK+D   K    + +TG+L 
Sbjct: 75   EQL-QAVLETLKETIELANVCVSEKQEGKLKMQSDLDSLSAKIDLSLKDCGLLMKTGVLG 133

Query: 913  NGYALVVSKPCLGASKEDMRFYVRDLLTRMKXGDXGMKKQA 1035
                  V+KP   ++++   F VR+LL R++ G    K++A
Sbjct: 134  E-----VTKPLSSSTQDLETFSVRELLARLQIGHLESKRKA 169

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 956,267,998
Number of Sequences: 1393205
Number of extensions: 23197230
Number of successful extensions: 96636
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 75985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91210
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60705001940
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GENLf016c09 BP063195 1 522 2 MF060f06_f BP031475 472 1036

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