Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005768A_C01 KMC005768A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79405.1|AC068197_15 F16A14.22 [Arabidopsis thaliana] 268 4e-71
ref|NP_172853.1| putative protein kinase; protein id: At1g14000.... 268 4e-71
gb|AAL77660.1| At1g14000/F7A19_9 [Arabidopsis thaliana] 268 4e-71
dbj|BAC10147.1| putative protein kinase [Oryza sativa (japonica ... 234 6e-61
pir||T05032 protein kinase homolog F13C5.120 - Arabidopsis thali... 114 7e-25
>gb|AAF79405.1|AC068197_15 F16A14.22 [Arabidopsis thaliana]
Length = 445
Score = 268 bits (685), Expect = 4e-71
Identities = 125/145 (86%), Positives = 135/145 (92%)
Frame = -3
Query: 596 VNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 417
VNSSADHLKVGDFGLSKLIKV++SHD+YKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA
Sbjct: 301 VNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 360
Query: 416 MILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRAKGYIPELRELTEQCWDADMNQRPSF 237
MILYEMLEGEPPFAN+EPYE AK V++GHRP FR+KG P+LREL +CWDADMNQRPSF
Sbjct: 361 MILYEMLEGEPPFANHEPYEAAKHVSDGHRPTFRSKGCTPDLRELIVKCWDADMNQRPSF 420
Query: 236 IDILKRLEKIKENLPSDHHWSLFNS 162
+DILKRLEKIKE LPSDHHW LF S
Sbjct: 421 LDILKRLEKIKETLPSDHHWGLFTS 445
>ref|NP_172853.1| putative protein kinase; protein id: At1g14000.1, supported by
cDNA: gi_18700096 [Arabidopsis thaliana]
gi|25513493|pir||C86273 protein kinases homolog F7A19.9
- Arabidopsis thaliana
gi|5080776|gb|AAD39286.1|AC007576_9 Similar to protein
kinases [Arabidopsis thaliana]
Length = 438
Score = 268 bits (685), Expect = 4e-71
Identities = 125/145 (86%), Positives = 135/145 (92%)
Frame = -3
Query: 596 VNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 417
VNSSADHLKVGDFGLSKLIKV++SHD+YKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA
Sbjct: 294 VNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 353
Query: 416 MILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRAKGYIPELRELTEQCWDADMNQRPSF 237
MILYEMLEGEPPFAN+EPYE AK V++GHRP FR+KG P+LREL +CWDADMNQRPSF
Sbjct: 354 MILYEMLEGEPPFANHEPYEAAKHVSDGHRPTFRSKGCTPDLRELIVKCWDADMNQRPSF 413
Query: 236 IDILKRLEKIKENLPSDHHWSLFNS 162
+DILKRLEKIKE LPSDHHW LF S
Sbjct: 414 LDILKRLEKIKETLPSDHHWGLFTS 438
>gb|AAL77660.1| At1g14000/F7A19_9 [Arabidopsis thaliana]
Length = 438
Score = 268 bits (685), Expect = 4e-71
Identities = 125/145 (86%), Positives = 135/145 (92%)
Frame = -3
Query: 596 VNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 417
VNSSADHLKVGDFGLSKLIKV++SHD+YKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA
Sbjct: 294 VNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 353
Query: 416 MILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRAKGYIPELRELTEQCWDADMNQRPSF 237
MILYEMLEGEPPFAN+EPYE AK V++GHRP FR+KG P+LREL +CWDADMNQRPSF
Sbjct: 354 MILYEMLEGEPPFANHEPYEAAKHVSDGHRPTFRSKGCTPDLRELIVKCWDADMNQRPSF 413
Query: 236 IDILKRLEKIKENLPSDHHWSLFNS 162
+DILKRLEKIKE LPSDHHW LF S
Sbjct: 414 LDILKRLEKIKETLPSDHHWGLFTS 438
>dbj|BAC10147.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 457
Score = 234 bits (597), Expect = 6e-61
Identities = 109/145 (75%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Frame = -3
Query: 596 VNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 417
VNS+A+HLKVGDFGLSK+IK + ++D+YKMTGETGSYRYMAPEVFKHR+YDKKVDVFSFA
Sbjct: 312 VNSAANHLKVGDFGLSKIIKAQHANDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFA 371
Query: 416 MILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRAKGYIPELRELTEQCWDADMNQRPSF 237
MILYEMLEG+PPF+NYEPYE AK V EGHRP FR+KG+ EL+EL E CW D++ RPSF
Sbjct: 372 MILYEMLEGDPPFSNYEPYEAAKYVGEGHRPPFRSKGFTNELKELIELCWSGDIHLRPSF 431
Query: 236 IDILKRLEKIKENLPS-DHHWSLFN 165
++ILKRLEKIKE L + DHHW LF+
Sbjct: 432 LEILKRLEKIKEYLAAHDHHWHLFS 456
>pir||T05032 protein kinase homolog F13C5.120 - Arabidopsis thaliana
gi|2832623|emb|CAA16752.1| protein kinase-like protein
[Arabidopsis thaliana] gi|7268689|emb|CAB78897.1|
protein kinase-like protein [Arabidopsis thaliana]
Length = 421
Score = 114 bits (286), Expect = 7e-25
Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Frame = -3
Query: 596 VNSSADHLKVGDFGLSKLIKVESSHDIYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFA 417
+ + HLKV DFG+SKL+ V+ T + S RY+APEVF YD K DVFSFA
Sbjct: 250 LRDDSGHLKVADFGVSKLVTVKEDKPF---TCQDISCRYIAPEVFTSEEYDTKADVFSFA 306
Query: 416 MILYEMLEGEPPFANYEPYEGAKCVAEGHRPNFRA--KGYIPELRELTEQCWDADMNQRP 243
+I+ EM+EG PFA E E ++ A HRP F+A K Y L+ L E+CW +RP
Sbjct: 307 LIVQEMIEGRMPFAEKEDSEASEAYAGKHRPLFKAPSKNYPHGLKTLIEECWHEKPAKRP 366
Query: 242 SFIDILKRLEKIKENLPSDHHWSL 171
+F +I+KRLE I ++ W +
Sbjct: 367 TFREIIKRLESILHHMGHKRQWRM 390
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 496,985,131
Number of Sequences: 1393205
Number of extensions: 10674127
Number of successful extensions: 35421
Number of sequences better than 10.0: 7719
Number of HSP's better than 10.0 without gapping: 31346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32638
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
