Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005766A_C01 KMC005766A_c01
(619 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL87457.1| serine/threonine protein kinase pk23 [Lycopersico... 152 3e-36
dbj|BAA22410.1| calcium-dependent protein kinase-related kinase ... 149 2e-35
dbj|BAA12691.1| CDPK-related protein kinase [Zea mays] 149 2e-35
pir||T02033 calcium/calmodulin-dependent protein kinase homolog ... 149 2e-35
ref|NP_197831.1| calcium dependent protein kinase-like protein; ... 147 8e-35
>gb|AAL87457.1| serine/threonine protein kinase pk23 [Lycopersicon esculentum]
Length = 598
Score = 152 bits (384), Expect = 3e-36
Identities = 71/102 (69%), Positives = 85/102 (82%)
Frame = -2
Query: 618 MESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNL 439
+E LSYK++DFEEFCAAAIS YQLEA W+ IA+ AF YF++ GNRVISVEELAQEMNL
Sbjct: 497 LEPLSYKQMDFEEFCAAAISTYQLEALENWEHIASAAFNYFEQEGNRVISVEELAQEMNL 556
Query: 438 GPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSRHRQ 313
GP+ Y+ + DWIR SD KLS GYTKFLHGVT+RSS++RH +
Sbjct: 557 GPTAYAFLKDWIRPSDRKLSFLGYTKFLHGVTMRSSSTRHHR 598
>dbj|BAA22410.1| calcium-dependent protein kinase-related kinase [Zea mays]
Length = 452
Score = 149 bits (377), Expect = 2e-35
Identities = 69/99 (69%), Positives = 85/99 (85%)
Frame = -2
Query: 618 MESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNL 439
+E L+Y+K+DFEEFCAAAIS YQLEA W++IA TAF +F++ GNRVISVEELAQE+NL
Sbjct: 352 LEPLAYRKMDFEEFCAAAISPYQLEALERWEEIAGTAFQHFEQEGNRVISVEELAQELNL 411
Query: 438 GPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSR 322
P+ YS++ DWIRKSDGKL+ G+TKFLHGVTIR SN+R
Sbjct: 412 APTHYSIVQDWIRKSDGKLNFLGFTKFLHGVTIRGSNTR 450
>dbj|BAA12691.1| CDPK-related protein kinase [Zea mays]
Length = 599
Score = 149 bits (377), Expect = 2e-35
Identities = 69/99 (69%), Positives = 85/99 (85%)
Frame = -2
Query: 618 MESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNL 439
+E L+Y+K+DFEEFCAAAIS YQLEA W++IA TAF +F++ GNRVISVEELAQE+NL
Sbjct: 499 LEPLAYRKMDFEEFCAAAISPYQLEALERWEEIAGTAFQHFEQEGNRVISVEELAQELNL 558
Query: 438 GPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSR 322
P+ YS++ DWIRKSDGKL+ G+TKFLHGVTIR SN+R
Sbjct: 559 APTHYSIVQDWIRKSDGKLNFLGFTKFLHGVTIRGSNTR 597
>pir||T02033 calcium/calmodulin-dependent protein kinase homolog - maize
gi|1839597|gb|AAB47181.1| calcium/calmodulin-dependent
protein kinase homolog|CaM kinase homolog|MCK1 [Zea
mays]
Length = 625
Score = 149 bits (377), Expect = 2e-35
Identities = 69/99 (69%), Positives = 85/99 (85%)
Frame = -2
Query: 618 MESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNL 439
+E L+Y+K+DFEEFCAAAIS YQLEA W++IA TAF +F++ GNRVISVEELAQE+NL
Sbjct: 525 LEPLAYRKMDFEEFCAAAISPYQLEALERWEEIAGTAFQHFEQEGNRVISVEELAQELNL 584
Query: 438 GPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSR 322
P+ YS++ DWIRKSDGKL+ G+TKFLHGVTIR SN+R
Sbjct: 585 APTHYSIVQDWIRKSDGKLNFLGFTKFLHGVTIRGSNTR 623
>ref|NP_197831.1| calcium dependent protein kinase-like protein; protein id:
At5g24430.1 [Arabidopsis thaliana]
Length = 594
Score = 147 bits (372), Expect = 8e-35
Identities = 69/101 (68%), Positives = 84/101 (82%)
Frame = -2
Query: 618 MESLSYKKLDFEEFCAAAISVYQLEAHPEWDKIAATAFAYFDETGNRVISVEELAQEMNL 439
M+ L+ KKLDFEEFCAAA+SVYQLEA EW++IA +AF +F+ GNR+ISV+ELA EM++
Sbjct: 494 MQPLAQKKLDFEEFCAAAVSVYQLEALEEWEQIATSAFEHFEHEGNRIISVQELAGEMSV 553
Query: 438 GPSTYSLMNDWIRKSDGKLSLFGYTKFLHGVTIRSSNSRHR 316
GPS Y L+ DWIR SDGKLS GY KFLHGVT+RSS+SR R
Sbjct: 554 GPSAYPLLKDWIRSSDGKLSFLGYAKFLHGVTVRSSSSRPR 594
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,734,452
Number of Sequences: 1393205
Number of extensions: 10314441
Number of successful extensions: 32816
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 28938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32558
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
