Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005758A_C01 KMC005758A_c01
(463 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37373.1|AF145234_1 NADPH:quinone oxidoreductase [Arabidops... 123 1e-27
ref|NP_189427.1| NADPH:quinone oxidoreductase (NQR); protein id:... 122 2e-27
dbj|BAC23037.1| NAD(P)H:quinone oxidoreductase [Solanum tuberosum] 114 4e-25
dbj|BAB64708.1| putative NADPH:quinone oxidoreductase [Oryza sat... 109 1e-23
dbj|BAB64710.1| putative NADPH:quinone oxidoreductase [Oryza sat... 106 1e-22
>gb|AAD37373.1|AF145234_1 NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Length = 196
Score = 123 bits (308), Expect = 1e-27
Identities = 57/73 (78%), Positives = 65/73 (88%)
Frame = -1
Query: 463 GGDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAIL 284
GG FGGGRS YHLRQIGV+LDLHFINKPEF L+AFQPP KFD++GNL+DE K KLK +L
Sbjct: 124 GGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKEKLKQVL 183
Query: 283 LSLQAFTLQLQGR 245
LSLQAFTL+LQG+
Sbjct: 184 LSLQAFTLRLQGK 196
>ref|NP_189427.1| NADPH:quinone oxidoreductase (NQR); protein id: At3g27890.1,
supported by cDNA: gi_5002231 [Arabidopsis thaliana]
gi|11994494|dbj|BAB02535.1| NADPH:quinone oxidoreductase
[Arabidopsis thaliana]
Length = 196
Score = 122 bits (305), Expect = 2e-27
Identities = 56/73 (76%), Positives = 65/73 (88%)
Frame = -1
Query: 463 GGDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAIL 284
GG FGGGRS YHLRQIGV+LDLHFINKPEF L+AFQPP KFD++GNL+DE K +LK +L
Sbjct: 124 GGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKERLKQVL 183
Query: 283 LSLQAFTLQLQGR 245
LSLQAFTL+LQG+
Sbjct: 184 LSLQAFTLRLQGK 196
>dbj|BAC23037.1| NAD(P)H:quinone oxidoreductase [Solanum tuberosum]
Length = 194
Score = 114 bits (286), Expect = 4e-25
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = -1
Query: 463 GGDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAIL 284
GG FGGGRS YHLRQIGV+LDLHFINKPEFFL+AFQ P KFDSDG L DE K +L+A+L
Sbjct: 120 GGGFGGGRSQYHLRQIGVFLDLHFINKPEFFLNAFQQPPKFDSDGVLTDEETKQRLRAVL 179
Query: 283 LSLQAFTLQLQGR 245
L+LQA L+L+G+
Sbjct: 180 LALQALALKLKGK 192
>dbj|BAB64708.1| putative NADPH:quinone oxidoreductase [Oryza sativa (japonica
cultivar-group)]
Length = 197
Score = 109 bits (273), Expect = 1e-23
Identities = 50/71 (70%), Positives = 59/71 (82%)
Frame = -1
Query: 463 GGDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAIL 284
GG FGGGRS YHLRQ+GV+LDLHFINKPE + AF+ P KFDSDGNLID + ++K +L
Sbjct: 124 GGGFGGGRSQYHLRQVGVFLDLHFINKPELAVKAFEQPPKFDSDGNLIDAQIRERIKQVL 183
Query: 283 LSLQAFTLQLQ 251
LSLQAFTL+LQ
Sbjct: 184 LSLQAFTLRLQ 194
>dbj|BAB64710.1| putative NADPH:quinone oxidoreductase [Oryza sativa (japonica
cultivar-group)]
Length = 203
Score = 106 bits (264), Expect = 1e-22
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = -1
Query: 460 GDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAILL 281
G GG RS YH+RQ+GV+LD+HFINKPE F+ A QPP KFDSDGNLID K +LK +LL
Sbjct: 124 GGSGGSRSMYHIRQVGVFLDIHFINKPEVFIKAHQPPKKFDSDGNLIDPEIKEELKDMLL 183
Query: 280 SLQAFTLQLQGRS*N 236
SLQAF L+LQG+ N
Sbjct: 184 SLQAFALRLQGKPAN 198
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 375,929,297
Number of Sequences: 1393205
Number of extensions: 7274798
Number of successful extensions: 13734
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13732
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11998661767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
