Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005754A_C01 KMC005754A_c01
(642 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA69931.1| PR10-1 protein [Medicago truncatula] gi|13928069... 209 3e-53
sp|Q43560|PR1_MEDSA Class-10 pathogenesis-related protein 1 (MSP... 207 1e-52
gb|AAK09428.1| PR10.2C protein [Lupinus luteus] 206 2e-52
pir||S47140 pathogenesis-related protein - chickpea gi|499171|em... 206 3e-52
gb|AAF77634.1| PR10.2B [Lupinus luteus] 205 5e-52
>emb|CAA69931.1| PR10-1 protein [Medicago truncatula] gi|13928069|emb|CAC37690.1|
class 10 PR protein [Medicago sativa]
Length = 157
Score = 209 bits (531), Expect = 3e-53
Identities = 103/155 (66%), Positives = 121/155 (77%)
Frame = -1
Query: 567 LYIFQDETTSTVAPARLYKALTIDGDTIIPKVIPGFRTVEIVEGNGGPGTIKKLTFEEDG 388
++ F+DETTS VAPARLYKAL D D +IPKVI +++EIVEGNGG GTIKKLTF E G
Sbjct: 3 VFNFEDETTSIVAPARLYKALVTDSDNLIPKVIDAIQSIEIVEGNGGAGTIKKLTFVEGG 62
Query: 387 QTKELLHKIDSIDQANLKYNYSIVGGTDLPATVEKISFEAHLVVGSNGGSIAKHNINYHT 208
+TK LHK+D +D N YNYSIVGG LP TVEKISFE+ L G +GGSIAK + Y T
Sbjct: 63 ETKYDLHKVDLVDDVNFAYNYSIVGGGGLPDTVEKISFESKLSAGPDGGSIAKLTVKYFT 122
Query: 207 KGNASFSEEEVMAGKAKGDALFKAIEGYVLANPDY 103
KG+A+ SEEE+ GKA+GD LFKA+EGYVLANPDY
Sbjct: 123 KGDAAPSEEEIKGGKARGDGLFKALEGYVLANPDY 157
>sp|Q43560|PR1_MEDSA Class-10 pathogenesis-related protein 1 (MSPR10-1)
gi|7442207|pir||T09659 pathogenesis-related protein
class 10 - alfalfa gi|1419683|emb|CAA67375.1| PR protein
from class 10 [Medicago sativa]
Length = 157
Score = 207 bits (526), Expect = 1e-52
Identities = 102/155 (65%), Positives = 120/155 (76%)
Frame = -1
Query: 567 LYIFQDETTSTVAPARLYKALTIDGDTIIPKVIPGFRTVEIVEGNGGPGTIKKLTFEEDG 388
++ F+DETTS VAPARLYKAL D D +IPKVI +++EIVEGNGG GTIKKLTF E G
Sbjct: 3 VFNFEDETTSIVAPARLYKALVTDSDNLIPKVIDAIQSIEIVEGNGGAGTIKKLTFVEGG 62
Query: 387 QTKELLHKIDSIDQANLKYNYSIVGGTDLPATVEKISFEAHLVVGSNGGSIAKHNINYHT 208
+TK LHK+D +D N YNYSIVGG LP TVEKISFE+ L G +GGS AK + Y T
Sbjct: 63 ETKYDLHKVDLVDDVNFAYNYSIVGGGGLPDTVEKISFESKLSAGPDGGSTAKLTVKYFT 122
Query: 207 KGNASFSEEEVMAGKAKGDALFKAIEGYVLANPDY 103
KG+A+ SEEE+ GKA+GD LFKA+EGYVLANPDY
Sbjct: 123 KGDAAPSEEEIKGGKARGDGLFKALEGYVLANPDY 157
>gb|AAK09428.1| PR10.2C protein [Lupinus luteus]
Length = 158
Score = 206 bits (524), Expect = 2e-52
Identities = 102/156 (65%), Positives = 123/156 (78%)
Frame = -1
Query: 567 LYIFQDETTSTVAPARLYKALTIDGDTIIPKVIPGFRTVEIVEGNGGPGTIKKLTFEEDG 388
++ FQDE+TST+APA+LYKAL D D IIPK + ++VEIVEGNGGPGTIKKLTF E G
Sbjct: 3 VFTFQDESTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGGPGTIKKLTFIEGG 62
Query: 387 QTKELLHKIDSIDQANLKYNYSIVGGTDLPATVEKISFEAHLVVGSNGGSIAKHNINYHT 208
++K +LHKI++ID+ANL YNYSIVGG LP T+EKISFE LV G+NGGSI K I T
Sbjct: 63 ESKYVLHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIET 122
Query: 207 KGNASFSEEEVMAGKAKGDALFKAIEGYVLANPDYN 100
KG+A +EEE A KA+GDA FKAIE Y+ A+PDYN
Sbjct: 123 KGDAQPNEEEGKAAKARGDAFFKAIESYLSAHPDYN 158
>pir||S47140 pathogenesis-related protein - chickpea gi|499171|emb|CAA56142.1|
pathogenesis related protein [Cicer arietinum]
Length = 158
Score = 206 bits (523), Expect = 3e-52
Identities = 102/156 (65%), Positives = 120/156 (76%)
Frame = -1
Query: 567 LYIFQDETTSTVAPARLYKALTIDGDTIIPKVIPGFRTVEIVEGNGGPGTIKKLTFEEDG 388
++ F+ ET STV PA+LYKA+ D D IIPK + +TVE VEGNGGPGTIKKLTF E G
Sbjct: 3 VFTFEQETASTVPPAKLYKAMVKDADVIIPKAVDAIKTVETVEGNGGPGTIKKLTFVEGG 62
Query: 387 QTKELLHKIDSIDQANLKYNYSIVGGTDLPATVEKISFEAHLVVGSNGGSIAKHNINYHT 208
QT +LHKI++ID+ANL YNYSIVGG L TVE+ FEA L G NGGSI K ++ Y T
Sbjct: 63 QTLYVLHKIEAIDEANLGYNYSIVGGAGLSETVERYHFEAKLCEGPNGGSIGKVSVKYQT 122
Query: 207 KGNASFSEEEVMAGKAKGDALFKAIEGYVLANPDYN 100
KG+A +E+EV GKAKGDALFKAIEGYVLANP+YN
Sbjct: 123 KGDAKPNEKEVQEGKAKGDALFKAIEGYVLANPNYN 158
>gb|AAF77634.1| PR10.2B [Lupinus luteus]
Length = 158
Score = 205 bits (521), Expect = 5e-52
Identities = 102/156 (65%), Positives = 122/156 (77%)
Frame = -1
Query: 567 LYIFQDETTSTVAPARLYKALTIDGDTIIPKVIPGFRTVEIVEGNGGPGTIKKLTFEEDG 388
++ FQDE TST+APA+LYKAL D D IIPK + ++VEIVEGNGGPGTIKKLTF E G
Sbjct: 3 VFTFQDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGGPGTIKKLTFIEGG 62
Query: 387 QTKELLHKIDSIDQANLKYNYSIVGGTDLPATVEKISFEAHLVVGSNGGSIAKHNINYHT 208
++K +LHKI++ID+ANL YNYSIVGG LP T+EKISFE LV G+NGGSI K I T
Sbjct: 63 ESKYVLHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIET 122
Query: 207 KGNASFSEEEVMAGKAKGDALFKAIEGYVLANPDYN 100
KG+A +EEE A KA+GDA FKAIE Y+ A+PDYN
Sbjct: 123 KGDAQPNEEEGKAAKARGDAFFKAIESYLSAHPDYN 158
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 582,419,590
Number of Sequences: 1393205
Number of extensions: 13379615
Number of successful extensions: 44504
Number of sequences better than 10.0: 281
Number of HSP's better than 10.0 without gapping: 42784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44263
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
