Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005753A_C01 KMC005753A_c01
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA10167.1| glucan endo-1,3-beta-d-glucosidase [Cicer arieti... 172 2e-42
emb|CAB91554.1| beta 1-3 glucanase [Vitis vinifera] 151 5e-36
gb|AAD04296.1| basic extracellular beta-1,3-glucanase precursor ... 151 5e-36
gb|AAO16642.1| beta-1,3-glucanase [Fragaria x ananassa] 149 2e-35
dbj|BAC66186.1| beta-1,3-glucanase [Fragaria x ananassa] 148 3e-35
>emb|CAA10167.1| glucan endo-1,3-beta-d-glucosidase [Cicer arietinum]
Length = 331
Score = 172 bits (436), Expect = 2e-42
Identities = 80/104 (76%), Positives = 89/104 (84%)
Frame = -3
Query: 503 LFDAILDGVYAALEKAGAPDMKVVVSESGWPSAGGDAANVQNAESYYKNLIQHVKGGTPK 324
LFDAILD +YAALEK G ++K+VVSESGWPS GG A+V NA++YY NLI+H KGGTPK
Sbjct: 228 LFDAILDSIYAALEKVGGSNVKIVVSESGWPSQGGTGASVGNAQTYYGNLIKHAKGGTPK 287
Query: 323 RPNGPIETYLFAMFDENRKPDPETERNFGLFRPDKSAKYQINFN 192
RPNGPIETYLFAMFDEN K DPETER FGLF PDKS KYQ+NFN
Sbjct: 288 RPNGPIETYLFAMFDENLKTDPETERYFGLFNPDKSPKYQLNFN 331
>emb|CAB91554.1| beta 1-3 glucanase [Vitis vinifera]
Length = 345
Score = 151 bits (381), Expect = 5e-36
Identities = 72/104 (69%), Positives = 86/104 (82%)
Frame = -3
Query: 503 LFDAILDGVYAALEKAGAPDMKVVVSESGWPSAGGDAANVQNAESYYKNLIQHVKGGTPK 324
LFDAILD VY+ALE+ G ++VV+SESGWPSAGG A V NA++Y NLIQHVKGGTPK
Sbjct: 243 LFDAILDAVYSALERVGGGSLQVVISESGWPSAGGTATTVGNAKTYNSNLIQHVKGGTPK 302
Query: 323 RPNGPIETYLFAMFDENRKPDPETERNFGLFRPDKSAKYQINFN 192
+P GPIETY+FAMF+ENRK PE E+++GLF P+K AKY INFN
Sbjct: 303 KPGGPIETYVFAMFNENRK-SPEYEKHWGLFLPNKQAKYPINFN 345
>gb|AAD04296.1| basic extracellular beta-1,3-glucanase precursor [Vitis vinifera]
Length = 134
Score = 151 bits (381), Expect = 5e-36
Identities = 72/104 (69%), Positives = 86/104 (82%)
Frame = -3
Query: 503 LFDAILDGVYAALEKAGAPDMKVVVSESGWPSAGGDAANVQNAESYYKNLIQHVKGGTPK 324
LFDAILD VY+ALE+ G ++VV+SESGWPSAGG A V NA++Y NLIQHVKGGTPK
Sbjct: 32 LFDAILDAVYSALERVGGGSLQVVISESGWPSAGGTATTVGNAKTYNSNLIQHVKGGTPK 91
Query: 323 RPNGPIETYLFAMFDENRKPDPETERNFGLFRPDKSAKYQINFN 192
+P GPIETY+FAMF+ENRK PE E+++GLF P+K AKY INFN
Sbjct: 92 KPGGPIETYVFAMFNENRK-SPEYEKHWGLFLPNKQAKYPINFN 134
>gb|AAO16642.1| beta-1,3-glucanase [Fragaria x ananassa]
Length = 347
Score = 149 bits (376), Expect = 2e-35
Identities = 70/103 (67%), Positives = 81/103 (77%)
Frame = -3
Query: 503 LFDAILDGVYAALEKAGAPDMKVVVSESGWPSAGGDAANVQNAESYYKNLIQHVKGGTPK 324
+FDA+LD Y+ALEKAGAP+M +VVSESGWPS GGDAA NA +YY LI HVK GTPK
Sbjct: 244 IFDALLDTHYSALEKAGAPNMAIVVSESGWPSEGGDAATTGNAGTYYSKLINHVKTGTPK 303
Query: 323 RPNGPIETYLFAMFDENRKPDPETERNFGLFRPDKSAKYQINF 195
RPNG IETYLFAMFDEN K E E++FG+F P+K KYQ+ F
Sbjct: 304 RPNGAIETYLFAMFDENLKDGAEVEKHFGIFSPNKQPKYQLTF 346
>dbj|BAC66186.1| beta-1,3-glucanase [Fragaria x ananassa]
Length = 346
Score = 148 bits (374), Expect = 3e-35
Identities = 71/103 (68%), Positives = 81/103 (77%)
Frame = -3
Query: 503 LFDAILDGVYAALEKAGAPDMKVVVSESGWPSAGGDAANVQNAESYYKNLIQHVKGGTPK 324
+FDAILD Y+ALEKAGAP+M +VVSESGWPS G DAA NA +YY NLI HVK GTPK
Sbjct: 243 IFDAILDTHYSALEKAGAPNMVIVVSESGWPSEGSDAATNGNAGTYYSNLINHVKTGTPK 302
Query: 323 RPNGPIETYLFAMFDENRKPDPETERNFGLFRPDKSAKYQINF 195
RPNG IETYLFAMFDEN K E E++FG+F P+K KYQ+ F
Sbjct: 303 RPNGAIETYLFAMFDENLKDGAEVEKHFGIFSPNKQPKYQLTF 345
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,238,221
Number of Sequences: 1393205
Number of extensions: 8561566
Number of successful extensions: 27332
Number of sequences better than 10.0: 329
Number of HSP's better than 10.0 without gapping: 25787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26944
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
