Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005748A_C01 KMC005748A_c01
(541 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182078.1| unknown protein; protein id: At2g45540.1 [Arabi... 260 7e-69
ref|NP_191651.1| putative protein; protein id: At3g60920.1 [Arab... 232 2e-60
gb|AAN38986.1| LvsC [Dictyostelium discoideum] 200 1e-50
pir||H96615 hypothetical protein F16M22.8 [imported] - Arabidops... 195 3e-49
gb|EAA06488.1| agCP13347 [Anopheles gambiae str. PEST] 194 7e-49
>ref|NP_182078.1| unknown protein; protein id: At2g45540.1 [Arabidopsis thaliana]
gi|7485640|pir||T00867 hypothetical protein At2g45540
[imported] - Arabidopsis thaliana
gi|2979554|gb|AAC06163.1| unknown protein [Arabidopsis
thaliana]
Length = 2946
Score = 260 bits (665), Expect = 7e-69
Identities = 123/143 (86%), Positives = 133/143 (92%)
Frame = -3
Query: 473 KISNFEYLMQFNTLAEPSYNDIAQYPVFPWILSDYSSESLDLSNPSSYRDLSKPVGALNP 294
+ISNFEYLMQ NTLA SYNDI QYPVFPWI+SD SSESLDLSNPS++RDLSKP+GALNP
Sbjct: 2239 EISNFEYLMQLNTLAGRSYNDITQYPVFPWIISDNSSESLDLSNPSTFRDLSKPIGALNP 2298
Query: 293 DRLKKFQERYASFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIKLQGGNFDHADR 114
+RLKKFQERY+SF+DPVIPKFHYGSHYSSAG VLYYL RVEPFTTL+I+LQGG FDHADR
Sbjct: 2299 ERLKKFQERYSSFEDPVIPKFHYGSHYSSAGAVLYYLARVEPFTTLSIQLQGGKFDHADR 2358
Query: 113 MFSDISGTWNGVLEDMSDVKELV 45
MFSD GTWNGVLEDMSDVKELV
Sbjct: 2359 MFSDFPGTWNGVLEDMSDVKELV 2381
>ref|NP_191651.1| putative protein; protein id: At3g60920.1 [Arabidopsis thaliana]
gi|11358248|pir||T50513 hypothetical protein T27I15_10 -
Arabidopsis thaliana gi|8388608|emb|CAB94128.1| putative
protein [Arabidopsis thaliana]
Length = 1857
Score = 232 bits (592), Expect = 2e-60
Identities = 110/143 (76%), Positives = 128/143 (88%), Gaps = 1/143 (0%)
Frame = -3
Query: 473 KISNFEYLMQFNTLAEPSYNDIAQYPVFPWILSDYSSESLDLSNPSSYRDLSK-PVGALN 297
+ISNFEYLMQ NTLA SYNDI QYP+FPWIL DY SE LDLSNPS+YRDLSK P+GALN
Sbjct: 1602 EISNFEYLMQLNTLAGRSYNDITQYPIFPWILCDYVSEILDLSNPSNYRDLSKVPIGALN 1661
Query: 296 PDRLKKFQERYASFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIKLQGGNFDHAD 117
P+RLKKFQE+++SF+DPVIPKFHYGSHYSSAG VL+YL RVEPFTTL+I+LQG FD AD
Sbjct: 1662 PERLKKFQEKHSSFEDPVIPKFHYGSHYSSAGAVLHYLARVEPFTTLSIQLQGRKFDRAD 1721
Query: 116 RMFSDISGTWNGVLEDMSDVKEL 48
++FSDI+ TW GVL+DM++VKEL
Sbjct: 1722 QIFSDIAATWKGVLQDMNNVKEL 1744
>gb|AAN38986.1| LvsC [Dictyostelium discoideum]
Length = 2402
Score = 200 bits (508), Expect = 1e-50
Identities = 92/156 (58%), Positives = 117/156 (74%)
Frame = -3
Query: 512 DFFHCAHSASDPNKISNFEYLMQFNTLAEPSYNDIAQYPVFPWILSDYSSESLDLSNPSS 333
D A S +ISNF+YLM NT+A +YND+ QYPVFPW+++DY+S LDL+ +
Sbjct: 1853 DMLKKATSEWQARRISNFDYLMTLNTIAGRTYNDLTQYPVFPWVIADYTSPVLDLNKAET 1912
Query: 332 YRDLSKPVGALNPDRLKKFQERYASFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLA 153
+RDLSKP+GALN RL+ F++RY SFDDPVIPKF+YGSHYSSAG VL+YL+R+EPFTT
Sbjct: 1913 FRDLSKPIGALNEKRLEIFKDRYESFDDPVIPKFYYGSHYSSAGIVLFYLIRLEPFTTQF 1972
Query: 152 IKLQGGNFDHADRMFSDISGTWNGVLEDMSDVKELV 45
+ LQGG FDH DRMF I+ W+ L +DVKEL+
Sbjct: 1973 LNLQGGRFDHPDRMFDSIALAWDNSLTSSTDVKELI 2008
>pir||H96615 hypothetical protein F16M22.8 [imported] - Arabidopsis thaliana
gi|12321834|gb|AAG50953.1|AC073943_3 hypothetical protein
[Arabidopsis thaliana]
Length = 1224
Score = 195 bits (496), Expect = 3e-49
Identities = 90/143 (62%), Positives = 114/143 (78%)
Frame = -3
Query: 473 KISNFEYLMQFNTLAEPSYNDIAQYPVFPWILSDYSSESLDLSNPSSYRDLSKPVGALNP 294
+I+NFEYLM NTLA SYND+ QYPVFPW+++DYSSE+LD S S++RDLSKPVGAL+
Sbjct: 604 EITNFEYLMILNTLAGRSYNDLTQYPVFPWVVADYSSETLDFSKASTFRDLSKPVGALDT 663
Query: 293 DRLKKFQERYASFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIKLQGGNFDHADR 114
R + F++RY SF DP IP F+YGSHYSS G+VLYYL+R+EPFT+L LQGG FDHADR
Sbjct: 664 RRFEIFEDRYHSFSDPDIPSFYYGSHYSSMGSVLYYLLRLEPFTSLHRSLQGGKFDHADR 723
Query: 113 MFSDISGTWNGVLEDMSDVKELV 45
+F + G++ L + SDVKEL+
Sbjct: 724 LFQSVEGSFRNCLSNTSDVKELI 746
>gb|EAA06488.1| agCP13347 [Anopheles gambiae str. PEST]
Length = 1308
Score = 194 bits (492), Expect = 7e-49
Identities = 86/143 (60%), Positives = 112/143 (78%)
Frame = -3
Query: 473 KISNFEYLMQFNTLAEPSYNDIAQYPVFPWILSDYSSESLDLSNPSSYRDLSKPVGALNP 294
+ISNFEYLM NT+A +YND+ QYPVFPW++++Y S LDLS PS+YRDLSKP+GALNP
Sbjct: 654 EISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESRELDLSQPSNYRDLSKPIGALNP 713
Query: 293 DRLKKFQERYASFDDPVIPKFHYGSHYSSAGTVLYYLVRVEPFTTLAIKLQGGNFDHADR 114
R + F+ERY ++D P IP FHYG+HYS+A VL +L+R+EPFTT+ + LQGG FDH DR
Sbjct: 714 SRREYFEERYETWDTPGIPPFHYGTHYSTAAFVLNWLIRIEPFTTMFLALQGGKFDHPDR 773
Query: 113 MFSDISGTWNGVLEDMSDVKELV 45
+FS ++ +W D SDVKEL+
Sbjct: 774 LFSSVALSWKNCQRDTSDVKELI 796
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,724,178
Number of Sequences: 1393205
Number of extensions: 9362191
Number of successful extensions: 25792
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 24881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25715
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
