Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005740A_C01 KMC005740A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL07491.1|AF414608_1 prunasin hydrolase isoform PH I precurs... 120 1e-26
gb|AAL07434.1|AF413213_1 prunasin hydrolase isoform PH C precurs... 120 1e-26
gb|AAL35324.1|AF411131_1 prunasin hydrolase isoform PH C precurs... 120 1e-26
pir||T09657 beta-glucosidase (EC 3.2.1.21) precursor, cyanogenic... 120 1e-26
gb|AAA91166.1| beta-glucosidase 118 4e-26
>gb|AAL07491.1|AF414608_1 prunasin hydrolase isoform PH I precursor [Prunus serotina]
Length = 513
Score = 120 bits (301), Expect = 1e-26
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = -3
Query: 566 IDYYFRHLFYLRSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYKNGLKRYKKL 387
IDYY+RHL YL++AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY NGL+R+ KL
Sbjct: 418 IDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLERHSKL 477
Query: 386 SAKWFTNFLKR 354
S WF +FLKR
Sbjct: 478 STHWFKSFLKR 488
>gb|AAL07434.1|AF413213_1 prunasin hydrolase isoform PH C precursor [Prunus serotina]
Length = 517
Score = 120 bits (301), Expect = 1e-26
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = -3
Query: 566 IDYYFRHLFYLRSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYKNGLKRYKKL 387
IDYY+RHL YL++AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY NGL+R+ KL
Sbjct: 422 IDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLERHSKL 481
Query: 386 SAKWFTNFLKR 354
S WF +FLKR
Sbjct: 482 STHWFKSFLKR 492
>gb|AAL35324.1|AF411131_1 prunasin hydrolase isoform PH C precursor [Prunus serotina]
Length = 542
Score = 120 bits (301), Expect = 1e-26
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = -3
Query: 566 IDYYFRHLFYLRSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYKNGLKRYKKL 387
IDYY+RHL YL++AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY NGL+R+ KL
Sbjct: 447 IDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLERHSKL 506
Query: 386 SAKWFTNFLKR 354
S WF +FLKR
Sbjct: 507 STHWFKSFLKR 517
>pir||T09657 beta-glucosidase (EC 3.2.1.21) precursor, cyanogenic - black cherry
gi|1236961|gb|AAA93032.1| prunasin hydrolase isoform PH
I precursor [Prunus serotina]
Length = 549
Score = 120 bits (301), Expect = 1e-26
Identities = 50/71 (70%), Positives = 63/71 (88%)
Frame = -3
Query: 566 IDYYFRHLFYLRSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYKNGLKRYKKL 387
IDYY+RHL YL++AI+ G+NV+GYFAWSLLDN+EWS GYTVRFG+N++DY NGL+R+ KL
Sbjct: 454 IDYYYRHLCYLQAAIKEGANVQGYFAWSLLDNFEWSEGYTVRFGINYIDYDNGLERHSKL 513
Query: 386 SAKWFTNFLKR 354
S WF +FLKR
Sbjct: 514 STHWFKSFLKR 524
>gb|AAA91166.1| beta-glucosidase
Length = 531
Score = 118 bits (296), Expect = 4e-26
Identities = 52/71 (73%), Positives = 60/71 (84%)
Frame = -3
Query: 566 IDYYFRHLFYLRSAIRNGSNVKGYFAWSLLDNYEWSSGYTVRFGMNFVDYKNGLKRYKKL 387
IDY +RHL YL+ AI G+NV+GYFAWSLLDN+EWS GYTVRFG+N+VDY NGLKR+ KL
Sbjct: 436 IDYCYRHLCYLQEAIIEGANVQGYFAWSLLDNFEWSEGYTVRFGINYVDYDNGLKRHSKL 495
Query: 386 SAKWFTNFLKR 354
S WF NFLKR
Sbjct: 496 STHWFKNFLKR 506
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 512,037,978
Number of Sequences: 1393205
Number of extensions: 11258051
Number of successful extensions: 44465
Number of sequences better than 10.0: 474
Number of HSP's better than 10.0 without gapping: 42736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44333
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
