Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005731A_C01 KMC005731A_c01
(586 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06217.1| endoxyloglucan transferase [Cicer arietinum] 328 4e-89
pir||B49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - ... 322 2e-87
dbj|BAA03922.1| endo-xyloglucan transferase [Glycine max] 322 2e-87
dbj|BAA34946.1| EXGT1 [Pisum sativum] 322 3e-87
pir||A49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - ... 308 2e-83
>emb|CAA06217.1| endoxyloglucan transferase [Cicer arietinum]
Length = 295
Score = 328 bits (840), Expect = 4e-89
Identities = 144/157 (91%), Positives = 151/157 (95%)
Frame = -3
Query: 584 RIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVRFPFDQPMKIYNSLWN 405
RIFLWFDPTK FHRYS+LWN+YQIVFFVDDVPIRVFKNSKDLGV+FPFDQPMKIYNSLWN
Sbjct: 139 RIFLWFDPTKEFHRYSILWNMYQIVFFVDDVPIRVFKNSKDLGVKFPFDQPMKIYNSLWN 198
Query: 404 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCATQGKSWWDQPEFRDLDAA 225
ADDWATRGGLEKTDWSKAPF+A YK FHIDGCEASVNAKFCATQGK WWDQPEFRDLDAA
Sbjct: 199 ADDWATRGGLEKTDWSKAPFVAGYKSFHIDGCEASVNAKFCATQGKRWWDQPEFRDLDAA 258
Query: 224 QWRRLRWVRQKYTIYNYCTDRKRIPILPPECKRDRDI 114
QWRRLRWVRQK+TIYNYCTDRKR+P +PPEC RDRDI
Sbjct: 259 QWRRLRWVRQKFTIYNYCTDRKRLPQIPPECTRDRDI 295
>pir||B49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - soybean
Length = 292
Score = 322 bits (826), Expect = 2e-87
Identities = 145/158 (91%), Positives = 151/158 (94%), Gaps = 1/158 (0%)
Frame = -3
Query: 584 RIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVRFPFDQPMKIYNSLWN 405
RI+LWFDPTK +HRYS+LWNLYQIVFFVD+VPIRVFKNSKDLGV+FPFDQPMKIYNSLWN
Sbjct: 135 RIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWN 194
Query: 404 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCATQGKSWWDQPEFRDLDAA 225
ADDWATRGGLEKTDWSKAPFIA+YKGFHIDGCEASVNAKFC TQGK WWDQPEFRDLDAA
Sbjct: 195 ADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAA 254
Query: 224 QWRRLRWVRQKYTIYNYCTDRKRIP-ILPPECKRDRDI 114
QWRRLRWVRQKYTIYNYCTD KR P I PPECKRDRDI
Sbjct: 255 QWRRLRWVRQKYTIYNYCTDTKRYPHISPPECKRDRDI 292
>dbj|BAA03922.1| endo-xyloglucan transferase [Glycine max]
Length = 295
Score = 322 bits (826), Expect = 2e-87
Identities = 145/158 (91%), Positives = 151/158 (94%), Gaps = 1/158 (0%)
Frame = -3
Query: 584 RIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVRFPFDQPMKIYNSLWN 405
RI+LWFDPTK +HRYS+LWNLYQIVFFVD+VPIRVFKNSKDLGV+FPFDQPMKIYNSLWN
Sbjct: 138 RIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWN 197
Query: 404 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCATQGKSWWDQPEFRDLDAA 225
ADDWATRGGLEKTDWSKAPFIA+YKGFHIDGCEASVNAKFC TQGK WWDQPEFRDLDAA
Sbjct: 198 ADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAA 257
Query: 224 QWRRLRWVRQKYTIYNYCTDRKRIP-ILPPECKRDRDI 114
QWRRLRWVRQKYTIYNYCTD KR P I PPECKRDRDI
Sbjct: 258 QWRRLRWVRQKYTIYNYCTDTKRYPHISPPECKRDRDI 295
>dbj|BAA34946.1| EXGT1 [Pisum sativum]
Length = 293
Score = 322 bits (824), Expect = 3e-87
Identities = 141/157 (89%), Positives = 150/157 (94%)
Frame = -3
Query: 584 RIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVRFPFDQPMKIYNSLWN 405
RIFLWFDPTK FHRYS+LWN+YQIVF+VDDVPIRVFKNSKDLGV+FPFDQPMKIYNSLWN
Sbjct: 137 RIFLWFDPTKEFHRYSILWNMYQIVFYVDDVPIRVFKNSKDLGVKFPFDQPMKIYNSLWN 196
Query: 404 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCATQGKSWWDQPEFRDLDAA 225
ADDWATRGGLEKTDWSKAPFIA YK FHIDGCEASVNAKFCATQGK WWDQ EFRDLDAA
Sbjct: 197 ADDWATRGGLEKTDWSKAPFIAGYKSFHIDGCEASVNAKFCATQGKRWWDQVEFRDLDAA 256
Query: 224 QWRRLRWVRQKYTIYNYCTDRKRIPILPPECKRDRDI 114
QWRRL+WVR+K+TIYNYC DRKR+P +PPECKRDRDI
Sbjct: 257 QWRRLKWVREKFTIYNYCNDRKRLPQIPPECKRDRDI 293
>pir||A49539 xyloglucan endo-1,4-beta-D-glucanase (EC 3.2.1.-) - adzuki bean
gi|469510|dbj|BAA03925.1| endo-xyloglucan transferase
[Vigna angularis] gi|21734664|dbj|BAC03237.1| xyloglucan
endotransglucosylase/hydrolase [Vigna angularis]
Length = 292
Score = 308 bits (790), Expect = 2e-83
Identities = 136/157 (86%), Positives = 145/157 (91%)
Frame = -3
Query: 584 RIFLWFDPTKAFHRYSVLWNLYQIVFFVDDVPIRVFKNSKDLGVRFPFDQPMKIYNSLWN 405
RI+LWFDPT +HRYSVLWN+YQIVF+VDD PIRVFKNS DLGV+FPF+QPMKIYNSLWN
Sbjct: 136 RIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWN 195
Query: 404 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCATQGKSWWDQPEFRDLDAA 225
ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFC TQGK WWDQPEFRDLDAA
Sbjct: 196 ADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAA 255
Query: 224 QWRRLRWVRQKYTIYNYCTDRKRIPILPPECKRDRDI 114
QW++L WVR KYTIYNYCTDRKR +PPEC RDRDI
Sbjct: 256 QWQKLAWVRNKYTIYNYCTDRKRYSQVPPECTRDRDI 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 568,402,432
Number of Sequences: 1393205
Number of extensions: 13993171
Number of successful extensions: 50083
Number of sequences better than 10.0: 197
Number of HSP's better than 10.0 without gapping: 44686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49648
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
