Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005725A_C01 KMC005725A_c01
(377 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563979.1| expressed protein; protein id: At1g15670.1, sup... 152 1e-36
gb|AAM64770.1| unknown [Arabidopsis thaliana] 142 8e-34
ref|NP_565238.1| expressed protein; protein id: At1g80440.1, sup... 142 8e-34
pir||T00693 hypothetical protein At2g44130 [imported] - Arabidop... 101 2e-21
ref|NP_566009.1| expressed protein; protein id: At2g44130.1, sup... 101 2e-21
>ref|NP_563979.1| expressed protein; protein id: At1g15670.1, supported by cDNA:
gi_12083253, supported by cDNA: gi_15146331, supported
by cDNA: gi_16323267 [Arabidopsis thaliana]
gi|25518687|pir||G86290 hypothetical protein F7H2.1 -
Arabidopsis thaliana gi|8927646|gb|AAF82137.1|AC034256_1
Contains similarity to Keap1 from Mus musculus
gb|AB020063 and contains two Kelch PF|01344 motifs.
ESTs gb|BE038279, gb|N38284, gb|T23017, gb|T21823,
gb|T45708, gb|T46757, gb|Z33921, gb|Z25966, gb|AI995282,
gb|AI100737 come from this gene. [Arabidopsis thaliana]
gi|12083254|gb|AAG48786.1|AF332423_1 unknown protein
[Arabidopsis thaliana] gi|15146332|gb|AAK83649.1|
At1g15670/F7H2_1 [Arabidopsis thaliana]
gi|16323268|gb|AAL15368.1| At1g15670/F7H2_1 [Arabidopsis
thaliana]
Length = 359
Score = 152 bits (384), Expect = 1e-36
Identities = 71/120 (59%), Positives = 90/120 (74%)
Frame = +3
Query: 12 PVYRLSVFEPETGNWSELTMPPEFDSGSGLPMFCQIAGVGYELVVMGGWDPESWKASNSV 191
PVYR+SV E TG SEL PP +GLP+FC++ VG +LVV+ G DP +W+ S+SV
Sbjct: 80 PVYRISVLELGTGLRSEL--PPVPGHSNGLPLFCRLVSVGSDLVVLCGLDPVTWRTSDSV 137
Query: 192 FIYNFLSATWRRGADMPGGPRTFFACTSDQDRTVYVAGGHDEEKNALKSALAYDVANDEW 371
F+++FL++TWR G MPGGPR+FFAC SD R V+VAGGHDE+KNA+ SAL YDVA D W
Sbjct: 138 FVFSFLTSTWRVGKSMPGGPRSFFACASDSQRNVFVAGGHDEDKNAMMSALVYDVAEDRW 197
>gb|AAM64770.1| unknown [Arabidopsis thaliana]
Length = 354
Score = 142 bits (359), Expect = 8e-34
Identities = 66/120 (55%), Positives = 88/120 (73%)
Frame = +3
Query: 12 PVYRLSVFEPETGNWSELTMPPEFDSGSGLPMFCQIAGVGYELVVMGGWDPESWKASNSV 191
P YR+SV E +G W+EL PP GLP+FC++ VG +L+V+GG DP +W+A +SV
Sbjct: 76 PEYRISVLESGSGLWTEL--PPIPGQTKGLPLFCRLVSVGSDLIVLGGLDPITWQAHDSV 133
Query: 192 FIYNFLSATWRRGADMPGGPRTFFACTSDQDRTVYVAGGHDEEKNALKSALAYDVANDEW 371
F+++FL++ WR GA MPG R+FF C SD DRTV VAGGH+EEK AL SA+ YDV+ D+W
Sbjct: 134 FVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCALTSAMVYDVSEDKW 193
>ref|NP_565238.1| expressed protein; protein id: At1g80440.1, supported by cDNA:
32885., supported by cDNA: gi_17528985 [Arabidopsis
thaliana] gi|25406664|pir||B96836 unknown protein
T21F11.23 [imported] - Arabidopsis thaliana
gi|6730740|gb|AAF27130.1|AC018849_18 unknown protein;
76867-75803 [Arabidopsis thaliana]
gi|17528986|gb|AAL38703.1| unknown protein [Arabidopsis
thaliana] gi|21436099|gb|AAM51296.1| unknown protein
[Arabidopsis thaliana]
Length = 354
Score = 142 bits (359), Expect = 8e-34
Identities = 66/120 (55%), Positives = 88/120 (73%)
Frame = +3
Query: 12 PVYRLSVFEPETGNWSELTMPPEFDSGSGLPMFCQIAGVGYELVVMGGWDPESWKASNSV 191
P YR+SV E +G W+EL PP GLP+FC++ VG +L+V+GG DP +W+A +SV
Sbjct: 76 PEYRISVLESGSGLWTEL--PPIPGQTKGLPLFCRLVSVGSDLIVLGGLDPITWQAHDSV 133
Query: 192 FIYNFLSATWRRGADMPGGPRTFFACTSDQDRTVYVAGGHDEEKNALKSALAYDVANDEW 371
F+++FL++ WR GA MPG R+FF C SD DRTV VAGGH+EEK AL SA+ YDV+ D+W
Sbjct: 134 FVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCALTSAMVYDVSEDKW 193
>pir||T00693 hypothetical protein At2g44130 [imported] - Arabidopsis thaliana
Length = 407
Score = 101 bits (252), Expect = 2e-21
Identities = 50/122 (40%), Positives = 71/122 (57%), Gaps = 2/122 (1%)
Frame = +3
Query: 12 PVYRLSVFEPETGNWSELTMPPEFDSGSGLPMFCQIAGV--GYELVVMGGWDPESWKASN 185
P + LSV+ W + P E +P+FC+ + +++++GGWDPE+ + +
Sbjct: 110 PRFGLSVYNAAMSTWHRVAFPEE----EQIPLFCECVVLQDAGKILLIGGWDPETLQPTR 165
Query: 186 SVFIYNFLSATWRRGADMPGGPRTFFACTSDQDRTVYVAGGHDEEKNALKSALAYDVAND 365
V++ F WRRGA M R+FFAC S VYVAGGHD++KNAL+SA YDV D
Sbjct: 166 DVYVLEFAGRKWRRGAPMKES-RSFFACASVSPTKVYVAGGHDDQKNALRSAEVYDVEKD 224
Query: 366 EW 371
EW
Sbjct: 225 EW 226
>ref|NP_566009.1| expressed protein; protein id: At2g44130.1, supported by cDNA:
6950., supported by cDNA: gi_18650631 [Arabidopsis
thaliana] gi|18650632|gb|AAL75886.1| At2g44130/F6E13.26
[Arabidopsis thaliana] gi|20197073|gb|AAC23417.2|
expressed protein [Arabidopsis thaliana]
gi|21700857|gb|AAM70552.1| At2g44130/F6E13.26
[Arabidopsis thaliana]
Length = 409
Score = 101 bits (252), Expect = 2e-21
Identities = 50/122 (40%), Positives = 71/122 (57%), Gaps = 2/122 (1%)
Frame = +3
Query: 12 PVYRLSVFEPETGNWSELTMPPEFDSGSGLPMFCQIAGV--GYELVVMGGWDPESWKASN 185
P + LSV+ W + P E +P+FC+ + +++++GGWDPE+ + +
Sbjct: 112 PRFGLSVYNAAMSTWHRVAFPEE----EQIPLFCECVVLQDAGKILLIGGWDPETLQPTR 167
Query: 186 SVFIYNFLSATWRRGADMPGGPRTFFACTSDQDRTVYVAGGHDEEKNALKSALAYDVAND 365
V++ F WRRGA M R+FFAC S VYVAGGHD++KNAL+SA YDV D
Sbjct: 168 DVYVLEFAGRKWRRGAPMKES-RSFFACASVSPTKVYVAGGHDDQKNALRSAEVYDVEKD 226
Query: 366 EW 371
EW
Sbjct: 227 EW 228
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 388,109,791
Number of Sequences: 1393205
Number of extensions: 9329200
Number of successful extensions: 30225
Number of sequences better than 10.0: 259
Number of HSP's better than 10.0 without gapping: 27598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30148
length of database: 448,689,247
effective HSP length: 101
effective length of database: 307,975,542
effective search space used: 7391413008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
