Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005720A_C01 KMC005720A_c01
(574 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD41024.1| sucrose transport protein SUT1 [Pisum sativum] 107 1e-22
pir||T12198 sucrose transport protein - fava bean gi|1935019|emb... 105 3e-22
pir||S48789 sucrose transport protein - common tobacco gi|575351... 92 4e-18
ref|NP_177333.1| sucrose transport protein SUC1; protein id: At1... 89 3e-17
gb|AAF65765.1|AF242307_1 sucrose transport protein [Euphorbia es... 89 4e-17
>gb|AAD41024.1| sucrose transport protein SUT1 [Pisum sativum]
Length = 524
Score = 107 bits (267), Expect = 1e-22
Identities = 51/64 (79%), Positives = 56/64 (86%)
Frame = -1
Query: 574 IVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASG 395
IVIPQM VSV SG WD LFGGGNLPAFVVGAVAA SGILSM+LLPSPPPD+ K+ +A+G
Sbjct: 461 IVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSMILLPSPPPDMAKSVSATG 520
Query: 394 GGFH 383
GGFH
Sbjct: 521 GGFH 524
>pir||T12198 sucrose transport protein - fava bean gi|1935019|emb|CAB07811.1|
sucrose transport protein [Vicia faba]
Length = 523
Score = 105 bits (263), Expect = 3e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = -1
Query: 574 IVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASG 395
IVIPQM VSV SG WD LFGGGNLPAFVVGAVAA SGILS++LLPSPPPD+ K+ +A+G
Sbjct: 460 IVIPQMFVSVLSGPWDALFGGGNLPAFVVGAVAALASGILSIILLPSPPPDMAKSVSATG 519
Query: 394 GGFH 383
GGFH
Sbjct: 520 GGFH 523
>pir||S48789 sucrose transport protein - common tobacco
gi|575351|emb|CAA57727.1| sucrose transporter [Nicotiana
tabacum]
Length = 507
Score = 92.4 bits (228), Expect = 4e-18
Identities = 44/64 (68%), Positives = 51/64 (78%)
Frame = -1
Query: 574 IVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASG 395
IV+PQMLVS++ G WDDLFGGGNLP F+VGAVAAA SGIL++ +LPSPP D A T
Sbjct: 446 IVVPQMLVSIAGGPWDDLFGGGNLPGFIVGAVAAAASGILALTMLPSPPADAKPATTM-- 503
Query: 394 GGFH 383
GGFH
Sbjct: 504 GGFH 507
>ref|NP_177333.1| sucrose transport protein SUC1; protein id: At1g71880.1, supported
by cDNA: gi_15146267 [Arabidopsis thaliana]
gi|481132|pir||S38197 sucrose transport protein SUC1 -
Arabidopsis thaliana gi|407094|emb|CAA53147.1|
sucrose-proton symporter [Arabidopsis thaliana]
gi|12324539|gb|AAG52225.1|AC021665_8 sucrose transport
protein SUC1; 26672-28438 [Arabidopsis thaliana]
gi|15146268|gb|AAK83617.1| At1g71880/F17M19_3
[Arabidopsis thaliana]
Length = 513
Score = 89.4 bits (220), Expect = 3e-17
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = -1
Query: 574 IVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDLVKAATASG 395
IVIPQM+VS+ G +D LFGGGNLPAF+V A+AAAISG+L++ +LPSPPPD KA T
Sbjct: 452 IVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLPSPPPDAPKATTM-- 509
Query: 394 GGFH 383
GGFH
Sbjct: 510 GGFH 513
>gb|AAF65765.1|AF242307_1 sucrose transport protein [Euphorbia esula]
Length = 530
Score = 89.0 bits (219), Expect = 4e-17
Identities = 48/65 (73%), Positives = 53/65 (80%), Gaps = 1/65 (1%)
Frame = -1
Query: 574 IVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVAAAISGILSMVLLPSPPPDL-VKAATAS 398
IVIPQMLVSV+SG +D LFGGGNLPAFVVGAVAAA SG+L++ LPSPPPDL KA T
Sbjct: 469 IVIPQMLVSVASGPFDALFGGGNLPAFVVGAVAAAASGVLALTYLPSPPPDLPAKALTV- 527
Query: 397 GGGFH 383
GFH
Sbjct: 528 --GFH 530
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 527,437,096
Number of Sequences: 1393205
Number of extensions: 11722645
Number of successful extensions: 34888
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 33507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34833
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
