Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005712A_C01 KMC005712A_c01
(550 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN03471.1| unknown protein [Glycine max] 57 2e-07
emb|CAB61742.1| plasma membrane intrinsic polypeptide [Cicer ari... 54 9e-07
sp|O77788|NFM_BOVIN Neurofilament triplet M protein (160 kDa neu... 54 1e-06
ref|NP_005900.1| microtubule-associated protein 1B, isoform 1 [H... 53 3e-06
pir||I51116 NF-180 - sea lamprey gi|632549|gb|AAA80106.1| NF-180 53 3e-06
>gb|AAN03471.1| unknown protein [Glycine max]
Length = 240
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/75 (41%), Positives = 39/75 (51%)
Frame = -3
Query: 524 TTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVE 345
T K EIV + K +P+ +E + E E PKE EKP EP + PP KE EKP E
Sbjct: 68 TIKSIEIVEPPKPKPPPQPEKPKEPEKSKEPEKPKEPEKPKEPEKPKEPPKPKEPEKPKE 127
Query: 344 PVAEVEKTEPPKP*K 300
P E +P +P K
Sbjct: 128 PEKPKEPEKPKEPEK 142
Score = 48.5 bits (114), Expect = 5e-05
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -3
Query: 494 EEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVEP--VAEVEKT 321
E+ KE EKP+ E+ E E PKE KP EP + P KE EKP EP E EK
Sbjct: 93 EKSKEPEKPKEPEKPKEP---EKPKEPPKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKP 149
Query: 320 EPPKP*KSP 294
+ P+ +SP
Sbjct: 150 KDPRSPRSP 158
Score = 47.0 bits (110), Expect = 2e-04
Identities = 33/83 (39%), Positives = 42/83 (49%), Gaps = 1/83 (1%)
Frame = -3
Query: 536 EEASTTKDREIVVEEEK-KEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEE 360
+E +K+ E E EK KE EKP+ E + E E PKE EKP EP + P KE
Sbjct: 90 KEPEKSKEPEKPKEPEKPKEPEKPK---EPPKPKEPEKPKEPEKPKEPEKPKEPEKPKEP 146
Query: 359 EKPVEPVAEVEKTEPPKP*KSPS 291
EKP +P P+ +SPS
Sbjct: 147 EKPKDP-------RSPRSPRSPS 162
Score = 32.3 bits (72), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAP 378
E+ K +E +E ++ ++P+ +E + E E PKE EKP +P +P
Sbjct: 105 EKPKEPEKPKEPPKPKEPEKPKEPEKPKEPEKPKEPEKPKEPEKPKDPRSPRSP 158
>emb|CAB61742.1| plasma membrane intrinsic polypeptide [Cicer arietinum]
Length = 208
Score = 54.3 bits (129), Expect = 9e-07
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -3
Query: 548 TKTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEP---PKEEEKPAEPVVAEAP 378
TKTEEE S K++EIV+EE KKEE+ E EKV ++P K+EEK E VV
Sbjct: 146 TKTEEETSGVKEKEIVIEEGKKEEK----IESVEEKVVADPVSDDKQEEKVVETVV---- 197
Query: 377 PAAKEEEKPVEP 342
A E+E+P++P
Sbjct: 198 -TAVEKEEPIKP 208
>sp|O77788|NFM_BOVIN Neurofilament triplet M protein (160 kDa neurofilament protein)
(Neurofilament medium polypeptide) (NF-M)
gi|3641350|gb|AAC36357.1| neurofilament-M subunit [Bos
taurus]
Length = 810
Score = 53.9 bits (128), Expect = 1e-06
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEK--VESEPPKEEEKPAEPVVAEAPPA 372
K EEE K+ + EKKEE+ V E+ + V++E P +EE PA+PV
Sbjct: 600 KVEEEKKEAKESPKEEKAEKKEEKPKDVPEKKKAESPVKAESPVKEEVPAKPVKVSPEKE 659
Query: 371 AKEEEKPVEPVAEVEKTE 318
AKEEEKP E E EK E
Sbjct: 660 AKEEEKPQEKEKEKEKVE 677
Score = 43.1 bits (100), Expect = 0.002
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEE-------TTEKVESEPPKEEEKPAEPVVAEA 381
EEE ++ EEE++E K AEE ++EK E E +E E AE EA
Sbjct: 408 EEEGEKEEEEGQEEEEEEEEAAKSDQAEEGGSEKEGSSEKEEGEQEEEGETEAEGEGEEA 467
Query: 380 PPAAKEEEK---------PVEPVAEVEKTEPPKP*KSP 294
AKEE+K P E +A K E P+ KSP
Sbjct: 468 AAEAKEEKKMEEKAEEVAPKEELAAEAKVEKPEKAKSP 505
Score = 38.9 bits (89), Expect = 0.041
Identities = 25/65 (38%), Positives = 32/65 (48%), Gaps = 4/65 (6%)
Frame = -3
Query: 536 EEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEE----EKPAEPVVAEAPPAA 369
+E K ++ E+E KEEEKPQ E+ EKVE KEE E E +
Sbjct: 644 KEEVPAKPVKVSPEKEAKEEEKPQEKEKEKEKVEEVGGKEEGGLKESRKEDIAINGEVEG 703
Query: 368 KEEEK 354
KEEE+
Sbjct: 704 KEEEQ 708
Score = 38.1 bits (87), Expect = 0.070
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Frame = -3
Query: 548 TKTEEEAST--------TKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPV 393
TK E+E S T++ + V+EE KEEE AEE EK E+E K + PV
Sbjct: 345 TKVEDEKSEMEEALTAITEELAVSVKEEVKEEE----AEEKEEKEEAEEEVVAAKKS-PV 399
Query: 392 VAEAPPAAKEEEKPVEPVAEVEKTEPPKP*KS 297
A AP +EE + E + E+ E + KS
Sbjct: 400 KATAPELKEEEGEKEEEEGQEEEEEEEEAAKS 431
Score = 36.2 bits (82), Expect = 0.27
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -3
Query: 500 VEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVEPVAEVEKT 321
VEE K + E E EKVE E + +E P E A K+EEKP + V E +K
Sbjct: 581 VEEVKPKAEAGAEKGEQKEKVEEEKKEAKESPKE------EKAEKKEEKP-KDVPEKKKA 633
Query: 320 EPPKP*KSP 294
E P +SP
Sbjct: 634 ESPVKAESP 642
Score = 35.8 bits (81), Expect = 0.35
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -3
Query: 488 KKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVEPVAEVEKTEPPK 309
+K E+K +V EE +K E PKEE+ + + P K+ E PV+ + V++ P K
Sbjct: 593 EKGEQKEKVEEE--KKEAKESPKEEKAEKKEEKPKDVPEKKKAESPVKAESPVKEEVPAK 650
Query: 308 P*K 300
P K
Sbjct: 651 PVK 653
Score = 33.9 bits (76), Expect = 1.3
Identities = 31/89 (34%), Positives = 43/89 (47%), Gaps = 8/89 (8%)
Frame = -3
Query: 536 EEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKE---EEK-----PAEPVVAEA 381
EE + K+ EE ++EEE AE E+ +E +E EEK P E + AEA
Sbjct: 435 EEGGSEKEGSSEKEEGEQEEEGETEAEGEGEEAAAEAKEEKKMEEKAEEVAPKEELAAEA 494
Query: 380 PPAAKEEEKPVEPVAEVEKTEPPKP*KSP 294
++ EK PVA+ T+ P KSP
Sbjct: 495 --KVEKPEKAKSPVAKSPTTKSPTA-KSP 520
>ref|NP_005900.1| microtubule-associated protein 1B, isoform 1 [Homo sapiens]
gi|1170875|sp|P46821|MAPB_HUMAN Microtubule-associated
protein 1B (MAP 1B) [Contains: MAP1 light chain LC1]
gi|473431|gb|AAA18904.1| microtubule-associated protein
1B
Length = 2468
Score = 52.8 bits (125), Expect = 3e-06
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKP-AEPVVAEAPPAA 369
K +E + K+ ++ E++K+E+EKP+ +E +K + P K+EEKP E V E
Sbjct: 631 KAAKEKTVKKETKVKPEDKKEEKEKPK--KEVAKKEDKTPIKKEEKPKKEEVKKEVKKEI 688
Query: 368 KEEEKPVEPVAEVEKTEPPK 309
K+EEK EP EV+K PPK
Sbjct: 689 KKEEKK-EPKKEVKKETPPK 707
Score = 41.2 bits (95), Expect = 0.008
Identities = 28/78 (35%), Positives = 44/78 (55%), Gaps = 4/78 (5%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEK---KEEEKPQVAEETTEKVESEPPKEEEK-PAEPVVAEAPPA 372
++E +E+ +E+K K+EEKP+ EE ++V+ E KEE+K P + V E PP
Sbjct: 649 KKEEKEKPKKEVAKKEDKTPIKKEEKPK-KEEVKKEVKKEIKKEEKKEPKKEVKKETPPK 707
Query: 371 AKEEEKPVEPVAEVEKTE 318
++E E EV+K E
Sbjct: 708 EVKKEVKKEEKKEVKKEE 725
Score = 38.9 bits (89), Expect = 0.041
Identities = 32/92 (34%), Positives = 47/92 (50%), Gaps = 7/92 (7%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEK--KEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPA 372
K ++E + +D+ + +EEK KEE K +V +E +K E + PK+E K P
Sbjct: 655 KPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEI-KKEEKKEPKKEVKKETPPKEVKKEV 713
Query: 371 AKEEEKPV-----EPVAEVEKTEPPKP*KSPS 291
KEE+K V EP E++K PK K S
Sbjct: 714 KKEEKKEVKKEEKEPKKEIKKL--PKDAKKSS 743
Score = 35.4 bits (80), Expect = 0.46
Identities = 29/89 (32%), Positives = 42/89 (46%), Gaps = 12/89 (13%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEK--KEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAE------ 384
E+ +++V+++K K E KP V E+ P KEE P + VAE
Sbjct: 575 EKPPKVESKEKVMVKKDKPVKTETKPSVTEKEV------PSKEEPSPVKAEVAEKQATDV 628
Query: 383 APPAAKE----EEKPVEPVAEVEKTEPPK 309
P AAKE +E V+P + E+ E PK
Sbjct: 629 KPKAAKEKTVKKETKVKPEDKKEEKEKPK 657
Score = 32.7 bits (73), Expect = 3.0
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Frame = -3
Query: 548 TKTEEEASTTKDREIVVEEEKKEEE-----KPQVAEETTEKVE--SEPPKEE--EKPAEP 396
TKT++ + TK V + + K + KP +E+++KV + P K+E EK A+P
Sbjct: 2243 TKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKESVEKAAKP 2302
Query: 395 VVAEAPPAAKEEEKPVE 345
AA+ EEK E
Sbjct: 2303 TTTPEVKAARGEEKDKE 2319
>pir||I51116 NF-180 - sea lamprey gi|632549|gb|AAA80106.1| NF-180
Length = 1110
Score = 52.8 bits (125), Expect = 3e-06
Identities = 31/79 (39%), Positives = 42/79 (52%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAK 366
K+EEEA+ E EEE+ EEE + E TE+ E++ ++EKP E V P A
Sbjct: 735 KSEEEAAEEAKDE--AEEEEAEEEAVEETEAATEEAEAKEASDDEKPEEEVKESEAPVAP 792
Query: 365 EEEKPVEPVAEVEKTEPPK 309
E +K EP A +K P K
Sbjct: 793 EAKKAPEPKAAPKKKAPAK 811
Score = 47.0 bits (110), Expect = 2e-04
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVA-------EETTEKVESEPPKEEEKPAEPVVA-- 387
E+E ++ E VEE K E+ KP + EE K +PPK + KPA P
Sbjct: 913 EDEKEDDEEEEEEVEEVKPEDAKPVKSKPAPAKEEEDEPKPAKQPPKPKRKPARPKEEPE 972
Query: 386 -EAPPAAK-----EEEKPVEPVAEVEKTEPPKP*KSP 294
+A PA + EE KP++ +A+ K P K K P
Sbjct: 973 DKAEPAKEKHSPVEERKPIKEIAKPAKAAPAKADKEP 1009
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/82 (36%), Positives = 46/82 (55%), Gaps = 2/82 (2%)
Frame = -3
Query: 548 TKTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAA 369
TK E EA + E EE+ EEE+ + E T++K +++ + EE+ AE AEA A
Sbjct: 617 TKEEVEAEAEVEEEGEAAEEEAEEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEA 676
Query: 368 KEE--EKPVEPVAEVEKTEPPK 309
+EE E+ VE ++ E+ E K
Sbjct: 677 EEEAGEEDVEAESKEEEEEDSK 698
Score = 43.9 bits (102), Expect = 0.001
Identities = 29/76 (38%), Positives = 38/76 (49%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAK 366
K EEEA ++ E ++ E E + AEE EK E+E + EE AE AEA +
Sbjct: 496 KEEEEAEAEEEEEEDRGRKEGEAEAEEEAEEEVEKEEAEEAEVEEAEAEETEAEAAEEEE 555
Query: 365 EEEKPVEPVAEVEKTE 318
E E E AE E+ E
Sbjct: 556 EAEGEEEAEAEGEEAE 571
Score = 43.5 bits (101), Expect = 0.002
Identities = 36/83 (43%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEE 360
EEE D E EEE+ EE KP+ A+ K P KEEE EP A+ PP K +
Sbjct: 911 EEEDEKEDDEE---EEEEVEEVKPEDAKPVKSK--PAPAKEEED--EPKPAKQPP--KPK 961
Query: 359 EKPVEPVAEVE-KTEPPKP*KSP 294
KP P E E K EP K SP
Sbjct: 962 RKPARPKEEPEDKAEPAKEKHSP 984
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/86 (38%), Positives = 45/86 (51%), Gaps = 4/86 (4%)
Frame = -3
Query: 539 EEEA--STTKDREIVVEEE--KKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPA 372
EEE S ++ E EEE K EEE + A++ E+ E+E EE A AEA A
Sbjct: 714 EEEVTKSDAEEAEAEAEEEAAKSEEEAAEEAKDEAEEEEAEEEAVEETEAATEEAEAKEA 773
Query: 371 AKEEEKPVEPVAEVEKTEPPKP*KSP 294
+ ++EKP E V E E P+ K+P
Sbjct: 774 S-DDEKPEEEVKESEAPVAPEAKKAP 798
Score = 42.7 bits (99), Expect = 0.003
Identities = 29/77 (37%), Positives = 41/77 (52%), Gaps = 3/77 (3%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEE 360
E +A ++ EEE++E E+ +V ET E+VE+E EEE A AE A +EE
Sbjct: 588 EAKAEVEEEEAEAEEEEEEEAEEEEVEAETKEEVEAEAEVEEEGEAAEEEAEEEEAEEEE 647
Query: 359 ---EKPVEPVAEVEKTE 318
+K AEVE+ E
Sbjct: 648 VTSKKAKTQEAEVEEEE 664
Score = 41.6 bits (96), Expect = 0.006
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 503 VVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEE-EKPVEPVAEVE 327
VV EK EEE+ + E+ E+ E+E +EE++ + AEA A+EE EK AEVE
Sbjct: 480 VVSAEKDEEEEEEEEEKEEEEAEAEEEEEEDRGRKEGEAEAEEEAEEEVEKEEAEEAEVE 539
Query: 326 KTE 318
+ E
Sbjct: 540 EAE 542
Score = 41.2 bits (95), Expect = 0.008
Identities = 30/84 (35%), Positives = 39/84 (45%), Gaps = 1/84 (1%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEE 360
E +A+ K VE E E AE +K ++E PK + KPA EA P KEE
Sbjct: 799 EPKAAPKKKAPAKVESPTSEPEDEPKAEVVEKKGKAEAPKPKAKPA-AAKKEAKPVEKEE 857
Query: 359 EKPVEPV-AEVEKTEPPKP*KSPS 291
E P E +K KP K+P+
Sbjct: 858 EPEESPTEEEPKKPAAAKPAKAPA 881
Score = 40.8 bits (94), Expect = 0.011
Identities = 26/69 (37%), Positives = 34/69 (48%), Gaps = 2/69 (2%)
Frame = -3
Query: 494 EEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVE--PVAEVEKT 321
EEK E KP A+ E E KE+++ E V E P E+ KPV+ P E+
Sbjct: 892 EEKPEPAKPAQAKPAPAAEEEEDEKEDDEEEEEEVEEVKP---EDAKPVKSKPAPAKEEE 948
Query: 320 EPPKP*KSP 294
+ PKP K P
Sbjct: 949 DEPKPAKQP 957
Score = 40.8 bits (94), Expect = 0.011
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEE--KPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAK 366
EEE S D E E+E +EEE + +V + E+ E+E +E K E EA A+
Sbjct: 693 EEEDSKEADAE---EDEAEEEEVKEEEVTKSDAEEAEAEAEEEAAKSEEEAAEEAKDEAE 749
Query: 365 EEEKPVEPVAEVE 327
EEE E V E E
Sbjct: 750 EEEAEEEAVEETE 762
Score = 40.0 bits (92), Expect = 0.019
Identities = 34/94 (36%), Positives = 40/94 (42%), Gaps = 18/94 (19%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEE-------------TTEKVESEPPKEEEKP 405
K S KD E EEE+KEEE+ + EE E+ E E KEE +
Sbjct: 476 KAAPVVSAEKDEEEEEEEEEKEEEEAEAEEEEEEDRGRKEGEAEAEEEAEEEVEKEEAEE 535
Query: 404 AEPVVA-----EAPPAAKEEEKPVEPVAEVEKTE 318
AE A EA A +EEE E AE E E
Sbjct: 536 AEVEEAEAEETEAEAAEEEEEAEGEEEAEAEGEE 569
Score = 40.0 bits (92), Expect = 0.019
Identities = 30/80 (37%), Positives = 40/80 (49%), Gaps = 6/80 (7%)
Frame = -3
Query: 539 EEEASTTKDREIVVEE------EKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAP 378
EEE K+ E EE EK+E E+ +V E E+ E+E +EEE+ AEA
Sbjct: 507 EEEDRGRKEGEAEAEEEAEEEVEKEEAEEAEVEEAEAEETEAEAAEEEEEAEGEEEAEAE 566
Query: 377 PAAKEEEKPVEPVAEVEKTE 318
EE + VE A +EK E
Sbjct: 567 GEEAEEAEEVEEEA-IEKAE 585
Score = 38.1 bits (87), Expect = 0.070
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Frame = -3
Query: 530 ASTTKDREIVVEEEKKEE-------EKPQVAEETTEKVESEP-PK----EEEKPAEPVVA 387
A+ K+ + V +EE+ EE +KP A+ + +P PK E+ +PA+P A
Sbjct: 844 AAAKKEAKPVEKEEEPEESPTEEEPKKPAAAKPAKAPAKPKPAPKAEAEEKPEPAKPAQA 903
Query: 386 EAPPAAKEEEKPVEPVAEVE------KTEPPKP*KS 297
+ PAA+EEE E E E K E KP KS
Sbjct: 904 KPAPAAEEEEDEKEDDEEEEEEVEEVKPEDAKPVKS 939
Score = 37.7 bits (86), Expect = 0.092
Identities = 33/84 (39%), Positives = 42/84 (49%), Gaps = 8/84 (9%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKP-QVAEETTEKVESEPPKEEE---KPAEPVVAEA- 381
+ EEEA E V E K+EEE+ + A+ ++ E E KEEE AE AEA
Sbjct: 671 EAEEEAEEEAGEEDVEAESKEEEEEDSKEADAEEDEAEEEEVKEEEVTKSDAEEAEAEAE 730
Query: 380 PPAAKEEEKPVEPV---AEVEKTE 318
AAK EE+ E AE E+ E
Sbjct: 731 EEAAKSEEEAAEEAKDEAEEEEAE 754
Score = 37.4 bits (85), Expect = 0.12
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTE---KVESEPPKEEEKPAEPV------ 393
+ EEE + E VEE + EE + + AEE E + E+E EE + AE V
Sbjct: 523 EAEEEVEKEEAEEAEVEEAEAEETEAEAAEEEEEAEGEEEAEAEGEEAEEAEEVEEEAIE 582
Query: 392 ---VAEAPPAAKEEEKPVEPVAEVEKTE 318
AEA +EEE E E E E
Sbjct: 583 KAEAAEAKAEVEEEEAEAEEEEEEEAEE 610
Score = 36.2 bits (82), Expect = 0.27
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = -3
Query: 497 EEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKEEEKPVEPVAEVEKTE 318
EEE+ E+E + EE E+V+ E + KP V P AKEEE +P +
Sbjct: 910 EEEEDEKEDDEEEEEEVEEVKPE----DAKP----VKSKPAPAKEEEDEPKPA-----KQ 956
Query: 317 PPKP*KSPS 291
PPKP + P+
Sbjct: 957 PPKPKRKPA 965
Score = 35.8 bits (81), Expect = 0.35
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 536 EEASTTKDREIVVEEEKKEE--EKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAKE 363
EE + + E EE +EE EK + AE E E E EEE+ E E KE
Sbjct: 560 EEEAEAEGEEAEEAEEVEEEAIEKAEAAEAKAEVEEEEAEAEEEEEEEAEEEEVEAETKE 619
Query: 362 EEKPVEPVAEVEK 324
E VE AEVE+
Sbjct: 620 E---VEAEAEVEE 629
Score = 34.7 bits (78), Expect = 0.78
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Frame = -3
Query: 545 KTEEEASTTKD---REIVVEEEKKEEEKPQVAEETTEK------VESEPPKEEEKPAEPV 393
+ EEE T+K +E VEEE+ E + + AEE E+ VE+E +EEE+ ++
Sbjct: 642 EAEEEEVTSKKAKTQEAEVEEEEAEAAEAE-AEEEAEEEAGEEDVEAESKEEEEEDSKEA 700
Query: 392 VAEAPPAAKEEEKPVE 345
AE A +EE K E
Sbjct: 701 DAEEDEAEEEEVKEEE 716
Score = 33.5 bits (75), Expect = 1.7
Identities = 26/77 (33%), Positives = 36/77 (45%), Gaps = 3/77 (3%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTE--KVESEPPKEEEKPAE-PVVAEAPPAA 369
EE + E +E+ + E K +V EE E + E E +EEE AE EA
Sbjct: 568 EEAEEAEEVEEEAIEKAEAAEAKAEVEEEEAEAEEEEEEEAEEEEVEAETKEEVEAEAEV 627
Query: 368 KEEEKPVEPVAEVEKTE 318
+EE + E AE E+ E
Sbjct: 628 EEEGEAAEEEAEEEEAE 644
Score = 33.5 bits (75), Expect = 1.7
Identities = 23/73 (31%), Positives = 33/73 (44%)
Frame = -3
Query: 545 KTEEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAEPVVAEAPPAAK 366
+ EE + + E E E++ E + + AEE E E K E A+ V E A+
Sbjct: 542 EAEETEAEAAEEEEEAEGEEEAEAEGEEAEEAEEVEEEAIEKAEAAEAKAEVEEEEAEAE 601
Query: 365 EEEKPVEPVAEVE 327
EEE+ EVE
Sbjct: 602 EEEEEEAEEEEVE 614
Score = 31.6 bits (70), Expect = 6.6
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Frame = -3
Query: 539 EEEASTTKDREIVVEEEKKEEEKPQVAEETTEKVESEPPKEEEKPAE--------PVVAE 384
E++A K++ VEE K +E + A+ K + EP E K E VV E
Sbjct: 972 EDKAEPAKEKHSPVEERKPIKEIAKPAKAAPAKADKEPEAAEPKKIEVKVKKVTKKVVEE 1031
Query: 383 APPAAKEEEKPVEPVAE-------VEKTEPP 312
+ ++EE E + E VEK P
Sbjct: 1032 IEQSTQQEESYEEIIEETIVSTKKVEKVAAP 1062
Score = 31.2 bits (69), Expect = 8.6
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = -3
Query: 524 TTKDREIVVEEEKKEEEKPQVAEET---TEKVE--SEPPKEEEKPAEPVVAEAPPAAKEE 360
T K E + + ++EE ++ EET T+KVE + P KE +K + V EAP A +
Sbjct: 1025 TKKVVEEIEQSTQQEESYEEIIEETIVSTKKVEKVAAPSKEPKKAVK--VKEAPKAVAQV 1082
Query: 359 EKPVEPVAE--VEKTEPPKP*KSP 294
E+ E + E V T+ + K+P
Sbjct: 1083 EEYEEIIEETVVSTTKKHEKGKAP 1106
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,832,224
Number of Sequences: 1393205
Number of extensions: 10272640
Number of successful extensions: 164617
Number of sequences better than 10.0: 4348
Number of HSP's better than 10.0 without gapping: 72565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128453
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
