Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005709A_C01 KMC005709A_c01
(584 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72532.1| aldehyde dehydrogenase 1 precursor [Lotus cornicu... 272 3e-72
pir||C86372 hypothetical protein F5O8.35 [imported] - Arabidopsi... 236 2e-61
gb|AAL99612.1|AF348416_1 mitochondrial aldehyde dehydrogenase [A... 236 2e-61
ref|NP_564204.1| putative aldehyde dehydrogenase; protein id: At... 236 2e-61
pir||T02301 aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A precurs... 234 5e-61
>gb|AAO72532.1| aldehyde dehydrogenase 1 precursor [Lotus corniculatus]
Length = 542
Score = 272 bits (695), Expect = 3e-72
Identities = 134/135 (99%), Positives = 134/135 (99%)
Frame = -3
Query: 582 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 403
LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG
Sbjct: 408 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 467
Query: 402 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYL 223
LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSL NYL
Sbjct: 468 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYL 527
Query: 222 QVKAVVTPLKNPAWL 178
QVKAVVTPLKNPAWL
Sbjct: 528 QVKAVVTPLKNPAWL 542
>pir||C86372 hypothetical protein F5O8.35 [imported] - Arabidopsis thaliana
gi|4056462|gb|AAC98035.1| Strong similarity to gb|Y09876
aldehyde dehydrogenase (NAD+) from Nicotiana tabacum and
a member of the aldehyde dehydrogenase family PF|00171.
ESTs gb|F15117, gb|R83958 and gb|586262 come from this
gene. [Arabidopsis thaliana]
Length = 519
Score = 236 bits (602), Expect = 2e-61
Identities = 114/135 (84%), Positives = 125/135 (92%)
Frame = -3
Query: 582 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 403
L+ GGDRLGSKG+Y+QPTVFS+V+DDMLIA DEIFGPVQTI KFK++DEVI RAN++RYG
Sbjct: 385 LQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYG 444
Query: 402 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYL 223
LAAGVFTQNL TA+ LMRALR GTVWINCFDV DA+IPFGGYKMSGIGREKGIYSL NYL
Sbjct: 445 LAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYL 504
Query: 222 QVKAVVTPLKNPAWL 178
QVKAVVT LKNPAWL
Sbjct: 505 QVKAVVTSLKNPAWL 519
>gb|AAL99612.1|AF348416_1 mitochondrial aldehyde dehydrogenase [Arabidopsis thaliana]
Length = 534
Score = 236 bits (602), Expect = 2e-61
Identities = 114/135 (84%), Positives = 125/135 (92%)
Frame = -3
Query: 582 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 403
L+ GGDRLGSKG+Y+QPTVFS+V+DDMLIA DEIFGPVQTI KFK++DEVI RAN++RYG
Sbjct: 400 LQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYG 459
Query: 402 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYL 223
LAAGVFTQNL TA+ LMRALR GTVWINCFDV DA+IPFGGYKMSGIGREKGIYSL NYL
Sbjct: 460 LAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYL 519
Query: 222 QVKAVVTPLKNPAWL 178
QVKAVVT LKNPAWL
Sbjct: 520 QVKAVVTSLKNPAWL 534
>ref|NP_564204.1| putative aldehyde dehydrogenase; protein id: At1g23800.1, supported
by cDNA: gi_14334931, supported by cDNA: gi_19850248,
supported by cDNA: gi_21281039 [Arabidopsis thaliana]
gi|14334932|gb|AAK59643.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|21281040|gb|AAM44960.1| putative aldehyde
dehydrogenase [Arabidopsis thaliana]
Length = 534
Score = 236 bits (602), Expect = 2e-61
Identities = 114/135 (84%), Positives = 125/135 (92%)
Frame = -3
Query: 582 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 403
L+ GGDRLGSKG+Y+QPTVFS+V+DDMLIA DEIFGPVQTI KFK++DEVI RAN++RYG
Sbjct: 400 LQAGGDRLGSKGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYG 459
Query: 402 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYL 223
LAAGVFTQNL TA+ LMRALR GTVWINCFDV DA+IPFGGYKMSGIGREKGIYSL NYL
Sbjct: 460 LAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYL 519
Query: 222 QVKAVVTPLKNPAWL 178
QVKAVVT LKNPAWL
Sbjct: 520 QVKAVVTSLKNPAWL 534
>pir||T02301 aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A precursor,
mitochondrial - common tobacco
gi|1743354|emb|CAA71003.1| aldehyde dehydrogenase (NAD+)
[Nicotiana tabacum]
Length = 542
Score = 234 bits (598), Expect = 5e-61
Identities = 110/135 (81%), Positives = 124/135 (91%)
Frame = -3
Query: 582 LECGGDRLGSKGFYVQPTVFSNVQDDMLIAQDEIFGPVQTIFKFKEIDEVIRRANSTRYG 403
LE GG+RLG +G+Y++PTVFSNV+DDMLIAQDEIFGPVQ+I KFK++D+VIRRAN++RYG
Sbjct: 408 LETGGERLGERGYYIKPTVFSNVKDDMLIAQDEIFGPVQSILKFKDVDDVIRRANNSRYG 467
Query: 402 LAAGVFTQNLATANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLLNYL 223
LAAGVFTQN+ TANTL RALR GTVW+NCFD FDA IPFGGYKMSG GREKG YSL NYL
Sbjct: 468 LAAGVFTQNIDTANTLTRALRVGTVWVNCFDTFDATIPFGGYKMSGHGREKGEYSLKNYL 527
Query: 222 QVKAVVTPLKNPAWL 178
QVKAVVTPLKNPAWL
Sbjct: 528 QVKAVVTPLKNPAWL 542
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 513,106,481
Number of Sequences: 1393205
Number of extensions: 10968971
Number of successful extensions: 30220
Number of sequences better than 10.0: 1404
Number of HSP's better than 10.0 without gapping: 28934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29705
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
