Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005702A_C01 KMC005702A_c01
(658 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana] 160 1e-38
ref|NP_195722.1| protein kinase -like protein; protein id: At5g0... 160 1e-38
gb|AAN06845.1| Putative protein kinase [Oryza sativa (japonica c... 75 6e-13
ref|NP_200457.1| protein kinase-like protein; protein id: At5g56... 75 1e-12
ref|NP_178731.2| putative protein kinase; protein id: At2g07180.... 69 4e-11
>dbj|BAC42590.1| putative protein kinase [Arabidopsis thaliana]
Length = 410
Score = 160 bits (406), Expect = 1e-38
Identities = 84/116 (72%), Positives = 92/116 (78%), Gaps = 1/116 (0%)
Frame = -2
Query: 657 KRKLLQIIEPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSIGPG 478
KRKLLQII+PRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ + G
Sbjct: 298 KRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCT--GDA 355
Query: 477 EVSLTGSNSGSVPFAMSKFSDYRMRHKFSNNVGPGAACRSPNPNCSPGAP-ACRVR 313
+ + +G+ FAM DYRM +F+ NVGPGA CRSPNPN SPG P ACRVR
Sbjct: 356 LIPCATTTAGAA-FAMGGVPDYRMHRRFAKNVGPGAICRSPNPNYSPGGPAACRVR 410
>ref|NP_195722.1| protein kinase -like protein; protein id: At5g01020.1 [Arabidopsis
thaliana] gi|9542860|emb|CAB99493.1| protein kinase-like
protein [Arabidopsis thaliana]
Length = 410
Score = 160 bits (406), Expect = 1e-38
Identities = 84/116 (72%), Positives = 92/116 (78%), Gaps = 1/116 (0%)
Frame = -2
Query: 657 KRKLLQIIEPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSIGPG 478
KRKLLQII+PRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ + G
Sbjct: 298 KRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCT--GDA 355
Query: 477 EVSLTGSNSGSVPFAMSKFSDYRMRHKFSNNVGPGAACRSPNPNCSPGAP-ACRVR 313
+ + +G+ FAM DYRM +F+ NVGPGA CRSPNPN SPG P ACRVR
Sbjct: 356 LIPCATTTAGAA-FAMGGVPDYRMHRRFAKNVGPGAICRSPNPNYSPGGPAACRVR 410
>gb|AAN06845.1| Putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 350
Score = 75.5 bits (184), Expect = 6e-13
Identities = 35/67 (52%), Positives = 47/67 (69%)
Frame = -2
Query: 657 KRKLLQIIEPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSIGPG 478
K+K+L I++PRL Y V+A QK LAY+CL++NPKARPLM D+V TLEPLQ P
Sbjct: 282 KKKVLGIVDPRLAEDYPVKAVQKTAMLAYHCLNRNPKARPLMRDIVATLEPLQQMEEDPS 341
Query: 477 EVSLTGS 457
++G+
Sbjct: 342 ISLVSGT 348
>ref|NP_200457.1| protein kinase-like protein; protein id: At5g56460.1 [Arabidopsis
thaliana] gi|10177845|dbj|BAB11274.1| protein
kinase-like protein [Arabidopsis thaliana]
gi|22135984|gb|AAM91574.1| protein kinase-like protein
[Arabidopsis thaliana]
Length = 408
Score = 74.7 bits (182), Expect = 1e-12
Identities = 31/55 (56%), Positives = 47/55 (85%)
Frame = -2
Query: 657 KRKLLQIIEPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSS 493
K+K+L I++P++ +Y V+A QKA LAY+CL++NPKARPLM D+V++LEPLQ++
Sbjct: 308 KKKVLNIVDPKMNCEYPVKAVQKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAT 362
>ref|NP_178731.2| putative protein kinase; protein id: At2g07180.1, supported by
cDNA: gi_19423981 [Arabidopsis thaliana]
gi|23297644|gb|AAN12999.1| putative protein kinase
[Arabidopsis thaliana]
Length = 442
Score = 69.3 bits (168), Expect = 4e-11
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = -2
Query: 654 RKLLQIIEPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSIGPGE 475
+KLL+II+PR++ QY +A K LAY CLSQNPK RPLM+ VVE LE L+ E
Sbjct: 320 KKLLRIIDPRMDGQYGTKALMKVAGLAYQCLSQNPKGRPLMNHVVEVLETLKDDGDAQEE 379
Query: 474 V 472
V
Sbjct: 380 V 380
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,113,854
Number of Sequences: 1393205
Number of extensions: 13006235
Number of successful extensions: 32897
Number of sequences better than 10.0: 323
Number of HSP's better than 10.0 without gapping: 31675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32879
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
