Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005690A_C01 KMC005690A_c01
(942 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198460.1| cytochrome p450 family; protein id: At5g36110.1... 252 5e-66
ref|NP_198462.1| putative protein; protein id: At5g36130.1 [Arab... 240 3e-62
dbj|BAC23044.1| cytochrome P450 [Solanum tuberosum] 171 1e-41
ref|NP_181813.1| taxane 13 alpha-hydroxylase(cytochrome P450 fam... 165 1e-39
dbj|BAC19981.1| 5-alpha-taxadienol-10-beta-hydroxylase-like prot... 164 2e-39
>ref|NP_198460.1| cytochrome p450 family; protein id: At5g36110.1 [Arabidopsis
thaliana] gi|8777295|dbj|BAA96885.1| cytochrome
P450-like [Arabidopsis thaliana]
Length = 477
Score = 252 bits (644), Expect = 5e-66
Identities = 108/144 (75%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Frame = -1
Query: 939 WDDVNKMRYSWNVACEVMRVAPPLQGGFREALHDFMFNGFSIPKGWKLYWSANSTHKSPE 760
W+D+ KMRYSWNVACEVMR+ PPL G FREA+ F F GF IPKGWKLYWSA +TH +P+
Sbjct: 332 WEDIEKMRYSWNVACEVMRIVPPLSGTFREAIDHFSFKGFYIPKGWKLYWSATATHMNPD 391
Query: 759 YFPEPEKFDPTRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLI 580
YFPEPE+F+P RFEG GP PYT+VPFGGGPRMCPGKEYARLEIL+FMHNLV RFKWEK+
Sbjct: 392 YFPEPERFEPNRFEGSGPKPYTYVPFGGGPRMCPGKEYARLEILIFMHNLVNRFKWEKVF 451
Query: 579 PDE-RIIVDPLPIPAKDLPVRLFP 511
P+E +I+VDPLPIP K LP+R+FP
Sbjct: 452 PNENKIVVDPLPIPDKGLPIRIFP 475
>ref|NP_198462.1| putative protein; protein id: At5g36130.1 [Arabidopsis thaliana]
gi|8777298|dbj|BAA96888.1| contains similarity to
cytochrome P450~gene_id:MAB16.8 [Arabidopsis thaliana]
Length = 140
Score = 240 bits (612), Expect = 3e-62
Identities = 104/138 (75%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Frame = -1
Query: 921 MRYSWNVACEVMRVAPPLQGGFREALHDFMFNGFSIPKGWKLYWSANSTHKSPEYFPEPE 742
MRYSWNVACEVMR+ PPL G FREA+ F F GF IPKGWKLYWSA +THK+PEYFPEPE
Sbjct: 1 MRYSWNVACEVMRIVPPLAGTFREAIDHFSFKGFYIPKGWKLYWSATATHKNPEYFPEPE 60
Query: 741 KFDPTRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIPDE-RI 565
KF+P+RFEG GP PYT+VPFGGG R+CPG+EYARLEIL+FMHNLVKRFKWEK+ P E ++
Sbjct: 61 KFEPSRFEGSGPKPYTYVPFGGGSRICPGREYARLEILIFMHNLVKRFKWEKVFPKENKL 120
Query: 564 IVDPLPIPAKDLPVRLFP 511
+ DP PIPAK LP+R+FP
Sbjct: 121 VADPAPIPAKGLPIRIFP 138
>dbj|BAC23044.1| cytochrome P450 [Solanum tuberosum]
Length = 474
Score = 171 bits (433), Expect = 1e-41
Identities = 77/143 (53%), Positives = 100/143 (69%), Gaps = 2/143 (1%)
Frame = -1
Query: 939 WDDVNKMRYSWNVACEVMRVAPPLQGGFREALHDFMFNGFSIPKGWKLYWSANSTHKSPE 760
W+D+ KM+ +W+ EV+R P +QG FRE + DF + F IPKGWK+Y S +T K+ E
Sbjct: 329 WNDIQKMKKTWSFVNEVLRNTPVVQGIFREVIEDFTYEDFYIPKGWKIYLSFGATQKNGE 388
Query: 759 YFPEPEKFDPTRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLI 580
YFP P KFDP+RFEG G PYT VPFGGG RMCPGKE+AR+ ILVF+H+L+K F+WE +
Sbjct: 389 YFPNPTKFDPSRFEGNGQVPYTSVPFGGGHRMCPGKEFARILILVFLHHLLKNFRWEPKV 448
Query: 579 PDERIIVD--PLPIPAKDLPVRL 517
P E+I+ L IP P+ L
Sbjct: 449 PSEKILYPFFLLAIPTDGYPITL 471
>ref|NP_181813.1| taxane 13 alpha-hydroxylase(cytochrome P450 family), putative;
protein id: At2g42850.1 [Arabidopsis thaliana]
gi|25282637|pir||A84859 probable cytochrome P450
[imported] - Arabidopsis thaliana
gi|4512670|gb|AAD21724.1| putative cytochrome P450
[Arabidopsis thaliana]
Length = 485
Score = 165 bits (417), Expect = 1e-39
Identities = 72/145 (49%), Positives = 101/145 (69%)
Frame = -1
Query: 936 DDVNKMRYSWNVACEVMRVAPPLQGGFREALHDFMFNGFSIPKGWKLYWSANSTHKSPEY 757
+DV KM+YSW V E MR++PP+ G FR+A+ D + G++IPKGWK+ W+ TH +PE
Sbjct: 342 EDVKKMKYSWQVVRETMRLSPPIFGSFRKAVADIDYGGYTIPKGWKILWTTYGTHYNPEI 401
Query: 756 FPEPEKFDPTRFEGEGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIP 577
F +P FDPTRF+ A YT++PFGGGPR+C G + A++ ILVFMH +V F W + P
Sbjct: 402 FQDPMSFDPTRFDKPIQA-YTYLPFGGGPRLCAGHQLAKISILVFMHFVVTGFDWSLVYP 460
Query: 576 DERIIVDPLPIPAKDLPVRLFPHKS 502
DE I +DPLP P+ +P+++ P S
Sbjct: 461 DETISMDPLPFPSLGMPIKISPKVS 485
>dbj|BAC19981.1| 5-alpha-taxadienol-10-beta-hydroxylase-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 475
Score = 164 bits (414), Expect = 2e-39
Identities = 72/142 (50%), Positives = 97/142 (67%), Gaps = 1/142 (0%)
Frame = -1
Query: 939 WDDVNKMRYSWNVACEVMRVAPPLQGGFREALHDFMFNGFSIPKGWKLYWSANSTHKSPE 760
WDDV++M+Y+W VA E +R PP+ G FR A+ D + G+ IPKGWK++ + + TH
Sbjct: 328 WDDVSRMKYTWKVALETLRTVPPIFGSFRTAIKDIEYRGYHIPKGWKVFTAQSITHLDGN 387
Query: 759 YFPEPEKFDPTRFEGE-GPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKL 583
+F +P KFDPTRF+ + PY FVPFGGGPRMCPG E+AR E LV MH LV++F+W+
Sbjct: 388 FFNDPVKFDPTRFDNQTSIPPYCFVPFGGGPRMCPGNEFARTETLVTMHYLVRQFRWKLC 447
Query: 582 IPDERIIVDPLPIPAKDLPVRL 517
+E DPLP+P LP+ L
Sbjct: 448 CKEEGYRKDPLPMPVLGLPMEL 469
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 851,655,777
Number of Sequences: 1393205
Number of extensions: 20236292
Number of successful extensions: 58065
Number of sequences better than 10.0: 2997
Number of HSP's better than 10.0 without gapping: 52582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55864
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 52691756080
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
