Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005689A_C01 KMC005689A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T12198 sucrose transport protein - fava bean gi|1935019|emb... 152 2e-36
gb|AAD41024.1| sucrose transport protein SUT1 [Pisum sativum] 152 4e-36
pir||S48789 sucrose transport protein - common tobacco gi|575351... 144 6e-34
gb|AAD45390.1|AF167415_1 sucrose transporter SUT2A [Apium graveo... 142 3e-33
gb|AAC99332.1| sucrose transporter [Apium graveolens] 141 7e-33
>pir||T12198 sucrose transport protein - fava bean gi|1935019|emb|CAB07811.1|
sucrose transport protein [Vicia faba]
Length = 523
Score = 152 bits (385), Expect = 2e-36
Identities = 77/104 (74%), Positives = 90/104 (86%)
Frame = -2
Query: 569 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 390
V+G+PLAI +S+PFALASI+SS +GAGQGLSLGVLNLAIV+PQM VS LSGPWDALFGGG
Sbjct: 422 VLGVPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGG 481
Query: 389 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPPGGGFH 258
NLPAFVVGAV A S I++I+LLP+P P D+AK+ S GGGFH
Sbjct: 482 NLPAFVVGAVAALASGILSIILLPSP-PPDMAKSVS-ATGGGFH 523
>gb|AAD41024.1| sucrose transport protein SUT1 [Pisum sativum]
Length = 524
Score = 152 bits (383), Expect = 4e-36
Identities = 77/104 (74%), Positives = 90/104 (86%)
Frame = -2
Query: 569 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 390
V+GIPLAI +S+PFALASI+SS +GAGQGLSLGVLNLAIV+PQM VS LSGPWDALFGGG
Sbjct: 423 VLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVLSGPWDALFGGG 482
Query: 389 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPPGGGFH 258
NLPAFVVGAV A S I++++LLP+P P D+AK+ S GGGFH
Sbjct: 483 NLPAFVVGAVAALASGILSMILLPSP-PPDMAKSVS-ATGGGFH 524
>pir||S48789 sucrose transport protein - common tobacco
gi|575351|emb|CAA57727.1| sucrose transporter [Nicotiana
tabacum]
Length = 507
Score = 144 bits (364), Expect = 6e-34
Identities = 74/104 (71%), Positives = 86/104 (82%)
Frame = -2
Query: 569 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 390
V+GIPLA+ FSVPFALASI+SS AG+GQGLSLGVLNLAIVVPQMLVS GPWD LFGGG
Sbjct: 408 VLGIPLAVTFSVPFALASIFSSNAGSGQGLSLGVLNLAIVVPQMLVSIAGGPWDDLFGGG 467
Query: 389 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPPGGGFH 258
NLP F+VGAV AA S I+A+ +LP+P PAD A+++ GGFH
Sbjct: 468 NLPGFIVGAVAAAASGILALTMLPSP-PADAKPATTM---GGFH 507
>gb|AAD45390.1|AF167415_1 sucrose transporter SUT2A [Apium graveolens]
gi|5566437|gb|AAD45391.1|AF167416_1 sucrose transporter
SUT2B [Apium graveolens]
Length = 512
Score = 142 bits (358), Expect = 3e-33
Identities = 70/99 (70%), Positives = 84/99 (84%)
Frame = -2
Query: 569 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 390
++GIPL+I FS+PFALASIYSS +GAGQGLSLGVLNLAIVVPQM+VS L+GP+D+LFGGG
Sbjct: 412 ILGIPLSITFSIPFALASIYSSGSGAGQGLSLGVLNLAIVVPQMIVSVLAGPFDSLFGGG 471
Query: 389 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPP 273
NLPAFVVGA+ AA+S ++AIVLLP P AK + P
Sbjct: 472 NLPAFVVGAISAAISGVLAIVLLPKPSKDAAAKLTLSGP 510
>gb|AAC99332.1| sucrose transporter [Apium graveolens]
Length = 512
Score = 141 bits (355), Expect = 7e-33
Identities = 70/99 (70%), Positives = 84/99 (84%)
Frame = -2
Query: 569 VMGIPLAINFSVPFALASIYSSAAGAGQGLSLGVLNLAIVVPQMLVSTLSGPWDALFGGG 390
++GIPL+I FS+PFALASIYSS +GAGQGLSLGVLNLAIVVPQM+VS L+GP+D+LFGGG
Sbjct: 412 ILGIPLSITFSIPFALASIYSSGSGAGQGLSLGVLNLAIVVPQMIVSVLAGPFDSLFGGG 471
Query: 389 NLPAFVVGAVMAAVSAIMAIVLLPTPKPADVAKASSLPP 273
NLPAFVVGA+ AA+S ++AIVLLP P AK + P
Sbjct: 472 NLPAFVVGAISAAISGVLAIVLLPKPCKDAAAKLTLSGP 510
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 568,603,381
Number of Sequences: 1393205
Number of extensions: 13723630
Number of successful extensions: 42543
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 40166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42448
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
