Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005684A_C01 KMC005684A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB11932.1| neoxanthin cleavage enzyme [Vigna unguiculata] 105 4e-22
gb|AAF26356.1|AF190462_1 9-cis-epoxycarotenoid dioxygenase [Phas... 105 4e-22
pir||T07123 nine-cis-epoxycarotenoid dioxygenase - tomato gi|276... 102 4e-21
dbj|BAC10550.1| nine-cis-epoxycarotenoid dioxygenase2 [Pisum sat... 102 4e-21
pir||T51936 probable 9-cis-epoxycarotenoid dioxygenase [imported... 99 3e-20
>dbj|BAB11932.1| neoxanthin cleavage enzyme [Vigna unguiculata]
Length = 612
Score = 105 bits (262), Expect = 4e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Frame = -2
Query: 566 DGYILTFVHDEKEWKSELQIVNAMNLKLEATIQLPSRVPYGFHGTFIESEDLKKQA 399
DGYIL FVHDEKEWKSELQIVNA NLKLEA+I+LPSRVPYGFHGTFI S+DL+KQA
Sbjct: 557 DGYILAFVHDEKEWKSELQIVNAQNLKLEASIKLPSRVPYGFHGTFIHSKDLRKQA 612
>gb|AAF26356.1|AF190462_1 9-cis-epoxycarotenoid dioxygenase [Phaseolus vulgaris]
Length = 615
Score = 105 bits (262), Expect = 4e-22
Identities = 49/56 (87%), Positives = 53/56 (94%)
Frame = -2
Query: 566 DGYILTFVHDEKEWKSELQIVNAMNLKLEATIQLPSRVPYGFHGTFIESEDLKKQA 399
DGYIL FVHDEKEWKSELQIVNA NLKLEA+I+LPSRVPYGFHGTFI S+DL+KQA
Sbjct: 560 DGYILAFVHDEKEWKSELQIVNAQNLKLEASIKLPSRVPYGFHGTFIHSKDLRKQA 615
>pir||T07123 nine-cis-epoxycarotenoid dioxygenase - tomato
gi|2769642|emb|CAB10168.1| nine-cis-epoxycarotenoid
dioxygenase [Lycopersicon esculentum]
gi|28974077|emb|CAD30202.1| 9-cis-epoxycarotenoid
dioxygenase [Lycopersicon esculentum]
Length = 605
Score = 102 bits (253), Expect = 4e-21
Identities = 47/56 (83%), Positives = 51/56 (90%)
Frame = -2
Query: 566 DGYILTFVHDEKEWKSELQIVNAMNLKLEATIQLPSRVPYGFHGTFIESEDLKKQA 399
DGYIL FVHDEKEWKSELQIVNAM+LKLEAT++LPSRVPYGFHGTFI + DL QA
Sbjct: 550 DGYILAFVHDEKEWKSELQIVNAMSLKLEATVKLPSRVPYGFHGTFINANDLANQA 605
>dbj|BAC10550.1| nine-cis-epoxycarotenoid dioxygenase2 [Pisum sativum]
Length = 601
Score = 102 bits (253), Expect = 4e-21
Identities = 47/55 (85%), Positives = 52/55 (94%)
Frame = -2
Query: 566 DGYILTFVHDEKEWKSELQIVNAMNLKLEATIQLPSRVPYGFHGTFIESEDLKKQ 402
DGYILTFVHDEKEWKSE+QIVNA+NLKLEA I LPSRVPYGFHGTFI S++L+KQ
Sbjct: 546 DGYILTFVHDEKEWKSEIQIVNAVNLKLEACIPLPSRVPYGFHGTFIHSKELEKQ 600
>pir||T51936 probable 9-cis-epoxycarotenoid dioxygenase [imported] - potato
gi|7209269|emb|CAB76920.1| putative
9-cis-epoxycarotenoid dioxygenase [Solanum tuberosum]
Length = 604
Score = 99.4 bits (246), Expect = 3e-20
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = -2
Query: 566 DGYILTFVHDEKEWKSELQIVNAMNLKLEATIQLPSRVPYGFHGTFIESEDLKKQA 399
DGYIL FVHDEKEW SELQIVNAM LKLEAT++LPSRVPYGFHGTFI + DL QA
Sbjct: 549 DGYILAFVHDEKEWTSELQIVNAMTLKLEATVKLPSRVPYGFHGTFINANDLANQA 604
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 459,808,302
Number of Sequences: 1393205
Number of extensions: 9386507
Number of successful extensions: 30566
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 28384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30210
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
