KMC005672A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC005672A_C01 KMC005672A_c01
cagagttgatagcactctgatCAAACAAGAGAAACAAATCCCTTTGTGGCTGCTGCTACT
GCTAGCTAGTGTCGCTGCAATGAAGAGTGCACCCATCATCACTTTCTCCTCCGACGACGT
TGTTGTCAAGTCACCGAACGACCTTCGTCTTTACCGCCTCATCGAACTCCATAACGGCCT
TCAGGCTTTGCTCGTTCATGATCCTGAGATTTACCCAGATGGCCCTCCCATGCCTGTTCA
AACCGACAATGAAGAAGAAGAAGATGATGATGAAGAGGAAGATGATGAAGATGAAGATGA
TGATGATGATGATGATGATGATGATGATGGGGAGGAAGAAGAAGATGATGATGATGATGA
TGAGGAAGAAGAGGGAAGTGAAGAAGTAGAAGTTGAAGGAAAGGACGGGGCCAAGGGTGC
TGCTGCTCAGACCAGAATGGCTGCAGCGGCTATGTGTGTAGGAATTGGCAGCTTCTCTGA
CCCGAATGAAGCACAAGGACTAGCACATTATATAGAACACATGCTCTTCATGGGGAGTGA
TG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005672A_C01 KMC005672A_c01
         (542 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G86203 probable N-arginine dibasic convertase [imported] - ...   170  9e-42
ref|NP_172173.1| unknown protein; protein id: At1g06900.1 [Arabi...   170  9e-42
ref|NP_666262.1| nardilysin, N-arginine dibasic convertase, NRD ...   140  1e-32
gb|AAH36128.1| hypothetical protein MGC25477 [Mus musculus] gi|2...   140  1e-32
ref|NP_037125.1| n-arginine dibasic convertase 1 [Rattus norvegi...   134  7e-31

>pir||G86203 probable N-arginine dibasic convertase [imported] - Arabidopsis
           thaliana gi|7523693|gb|AAF63132.1|AC011001_2 Putative
           N-arginine dibasic convertase [Arabidopsis thaliana]
          Length = 1039

 Score =  170 bits (431), Expect = 9e-42
 Identities = 87/156 (55%), Positives = 116/156 (73%)
 Frame = +2

Query: 71  VAAMKSAPIITFSSDDVVVKSPNDLRLYRLIELHNGLQALLVHDPEIYPDGPPMPVQTDN 250
           +++MKS   +    D+VVVKSPND RLYR+IEL NGL ALL+HDP+IYP+G  +P Q D 
Sbjct: 1   MSSMKSVSAL----DNVVVKSPNDRRLYRVIELENGLCALLIHDPDIYPEG-SVPDQIDE 55

Query: 251 EEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGKDGAKGAAAQ 430
           ++E+ ++E+ D   EDDDDD+DD++DGE +E+D+D+DE+       EV+GK        Q
Sbjct: 56  DDEDGEEEDSDGSSEDDDDDEDDEEDGEGDEEDEDEDED-------EVKGK-----GDHQ 103

Query: 431 TRMAAAAMCVGIGSFSDPNEAQGLAHYIEHMLFMGS 538
           T+ AAAAMCV +GSF DP EAQGLAH++EHMLFMGS
Sbjct: 104 TKKAAAAMCVSMGSFLDPPEAQGLAHFLEHMLFMGS 139

>ref|NP_172173.1| unknown protein; protein id: At1g06900.1 [Arabidopsis thaliana]
          Length = 1023

 Score =  170 bits (431), Expect = 9e-42
 Identities = 87/156 (55%), Positives = 116/156 (73%)
 Frame = +2

Query: 71  VAAMKSAPIITFSSDDVVVKSPNDLRLYRLIELHNGLQALLVHDPEIYPDGPPMPVQTDN 250
           +++MKS   +    D+VVVKSPND RLYR+IEL NGL ALL+HDP+IYP+G  +P Q D 
Sbjct: 1   MSSMKSVSAL----DNVVVKSPNDRRLYRVIELENGLCALLIHDPDIYPEG-SVPDQIDE 55

Query: 251 EEEEDDDEEEDDEDEDDDDDDDDDDDGEEEEDDDDDDEEEEGSEEVEVEGKDGAKGAAAQ 430
           ++E+ ++E+ D   EDDDDD+DD++DGE +E+D+D+DE+       EV+GK        Q
Sbjct: 56  DDEDGEEEDSDGSSEDDDDDEDDEEDGEGDEEDEDEDED-------EVKGK-----GDHQ 103

Query: 431 TRMAAAAMCVGIGSFSDPNEAQGLAHYIEHMLFMGS 538
           T+ AAAAMCV +GSF DP EAQGLAH++EHMLFMGS
Sbjct: 104 TKKAAAAMCVSMGSFLDPPEAQGLAHFLEHMLFMGS 139

>ref|NP_666262.1| nardilysin, N-arginine dibasic convertase, NRD convertase 1; RIKEN
           cDNA 2600011I06 gene [Mus musculus]
           gi|20073094|gb|AAH26832.1| Similar to N-arginine dibasic
           convertase 1 [Mus musculus]
          Length = 1161

 Score =  140 bits (352), Expect = 1e-32
 Identities = 76/160 (47%), Positives = 105/160 (65%), Gaps = 18/160 (11%)
 Frame = +2

Query: 113 DDVVVKSPNDLRLYRLIELHNGLQALLVHDPEIYPDGPPMPVQTDNEEEEDDDEEEDDED 292
           D  ++KSP+D + YR I+L NGLQALL+ D             TD EEEE+++EEE+D+D
Sbjct: 97  DPEIIKSPSDPKQYRYIKLQNGLQALLISDLSNVEGKTGNA--TDEEEEEEEEEEEEDDD 154

Query: 293 EDDDDDDDDDDDG-------------EEEEDDDDDDEEEEG---SEEVEVEGKDGAKGAA 424
           +DDDDDDDD+D G             EEE DDDDDDE ++    +EE E+E  +    A 
Sbjct: 155 DDDDDDDDDEDSGAEIQDDDEEGFDDEEEFDDDDDDEHDDDDLENEENELEELEERVEAR 214

Query: 425 AQT--RMAAAAMCVGIGSFSDPNEAQGLAHYIEHMLFMGS 538
            +T  + +AAA+CVG+GSF+DP++  GLAH++EHM+FMGS
Sbjct: 215 KKTTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGS 254

>gb|AAH36128.1| hypothetical protein MGC25477 [Mus musculus]
           gi|26327403|dbj|BAC27445.1| unnamed protein product [Mus
           musculus]
          Length = 1161

 Score =  140 bits (352), Expect = 1e-32
 Identities = 76/160 (47%), Positives = 105/160 (65%), Gaps = 18/160 (11%)
 Frame = +2

Query: 113 DDVVVKSPNDLRLYRLIELHNGLQALLVHDPEIYPDGPPMPVQTDNEEEEDDDEEEDDED 292
           D  ++KSP+D + YR I+L NGLQALL+ D             TD EEEE+++EEE+D+D
Sbjct: 97  DPEIIKSPSDPKQYRYIKLQNGLQALLISDLSNVEGKTGNA--TDEEEEEEEEEEEEDDD 154

Query: 293 EDDDDDDDDDDDG-------------EEEEDDDDDDEEEEG---SEEVEVEGKDGAKGAA 424
           +DDDDDDDD+D G             EEE DDDDDDE ++    +EE E+E  +    A 
Sbjct: 155 DDDDDDDDDEDSGAEIQDDDEEGFDDEEEFDDDDDDEHDDDDLENEENELEELEERVEAR 214

Query: 425 AQT--RMAAAAMCVGIGSFSDPNEAQGLAHYIEHMLFMGS 538
            +T  + +AAA+CVG+GSF+DP++  GLAH++EHM+FMGS
Sbjct: 215 KKTTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGS 254

>ref|NP_037125.1| n-arginine dibasic convertase 1 [Rattus norvegicus]
           gi|1352519|sp|P47245|NRDC_RAT Nardilysin precursor
           (N-arginine dibasic convertase) (NRD convertase) (NRD-C)
           gi|2144085|pir||I59311 nardilysin (EC 3.4.24.61)
           precursor [validated] - rat gi|529592|gb|AAA21818.1| NRD
           convertase
          Length = 1161

 Score =  134 bits (337), Expect = 7e-31
 Identities = 71/158 (44%), Positives = 103/158 (64%), Gaps = 16/158 (10%)
 Frame = +2

Query: 113 DDVVVKSPNDLRLYRLIELHNGLQALLVHDPEIYPD--GPPMPVQTDNEEEEDDDEEEDD 286
           D  ++KSP+D + YR I+L NGLQALL+ D        G     + + EEEE++ EEE++
Sbjct: 97  DPEIIKSPSDPKQYRYIKLQNGLQALLISDLSNVEGKTGNATDEEEEEEEEEEEGEEEEE 156

Query: 287 EDEDDDDDDDDDD------------DGEEEEDDDDDDEEEEGSEEVEVEGKDGAKGAAAQ 430
           E+EDDDDDDD+D             D EEE DDD+ D+++  +EE E+E  +    A  +
Sbjct: 157 EEEDDDDDDDEDSGAEIQDDDEEGFDDEEEFDDDEHDDDDLDNEENELEELEERVEARKK 216

Query: 431 T--RMAAAAMCVGIGSFSDPNEAQGLAHYIEHMLFMGS 538
           T  + +AAA+CVG+GSF+DP++  GLAH++EHM+FMGS
Sbjct: 217 TTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGS 254

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,249,038
Number of Sequences: 1393205
Number of extensions: 13989631
Number of successful extensions: 1338569
Number of sequences better than 10.0: 21236
Number of HSP's better than 10.0 without gapping: 135277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590555
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MPDL086b04_f AV780967 1 543
2 MPDL083g01_f AV780835 10 460




Lotus japonicus
Kazusa DNA Research Institute